RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 DNAJC15Q9Y5T4 150 aa7.22□□□□□ -1.25
CLCN3-202ENST00000360642 C15orf38-AP3S2A0A0A6YYH1 394 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 MTMR11A4FU01 709 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 H3BMM5 538 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 M0R3H8 397 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 NRP2O60462 931 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 CDK14O94921 469 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 ESR1P03372 595 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 HMBSP08397 361 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 SMIM18P0DKX4 95 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 TSPAN8P19075 237 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 TACR2P21452 398 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 GPX3P22352 226 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 HOXD9P28356 352 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 TRHRP34981 398 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 STC1P52823 247 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 ACLYP53396 1101 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 CREB5Q02930 508 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 GPR17Q13304 367 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 MTA1Q13330 715 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 GALNT3Q14435 633 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 SETMARQ53H47 684 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 FAM171A1Q5VUB5 890 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 IL23RQ5VWK5 629 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 MRNIPQ6NTE8 343 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 ARPINQ7Z6K5 226 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 PHYKPLQ8IUZ5 450 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 OR13C4Q8NGS5 318 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 OR4L1Q8NH43 312 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 BLOC1S5Q8TDH9 187 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 TFB2MQ9H5Q4 396 aaKnown RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 SPAG4Q9NPE6 437 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 ADA2Q9NZK5 511 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 HACD3Q9P035 362 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 MYOTQ9UBF9 498 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 MED16Q9Y2X0 877 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 A0A0D9SEW6 157 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 TCRBV3S1A0A5B6 114 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 PPP6CO00743 305 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 GPC4O75487 556 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 COL6A1P12109 1028 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 ZNF26P17031 533 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 TCN1P20061 433 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 CNPY1Q3B7I2 92 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 C6orf10Q5SRN2 563 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 IRAK1BP1Q5VVH5 260 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 KANK2Q63ZY3 851 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 GAREM2Q75VX8 874 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 ZAR1Q86SH2 424 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 GLB1L3Q8NCI6 653 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 OR9I1Q8NGQ6 314 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 SLCO4A1Q96BD0 722 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 SLC35A4Q96G79 324 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 CDKN2AIPNLQ96HQ2 116 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 B3GALT6Q96L58 329 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 UHRF1Q96T88 793 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 GPATCH1Q9BRR8 931 aaKnown RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 CENPKQ9BS16 269 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 PCDHAC1Q9H158 963 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 EPB41L1Q9H4G0 881 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 RETREG1Q9H6L5 497 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 FBRSL1Q9HCM7 1045 aaKnown RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 INTS10Q9NVR2 710 aaKnown RBP7.21□□□□□ -1.26
CLCN3-202ENST00000360642 MARCH5Q9NX47 278 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 EPS15L1Q9UBC2 864 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 PCDHGB4Q9UN71 923 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 PCDHGB5Q9Y5G0 923 aa7.21□□□□□ -1.26
CLCN3-202ENST00000360642 ATP6AP2A0A1C7CYW4 349 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 EME2A4GXA9 379 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 H0YJX3 145 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 H3BNC9 293 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ATP6AP2O75787 350 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 NDST3O95803 873 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SLC4A1P02730 911 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SERPINF2P08697 491 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CD40P25942 277 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SLC6A4P31645 630 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 KCNQ1P51787 676 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ZNF140P52738 457 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ATXN3P54252 364 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CDH13P55290 713 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ROR2Q01974 943 aaKnown RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ZNF235Q14590 738 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SPATA24Q86W54 205 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 HEATR4Q86WZ0 1026 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 PTGR2Q8N8N7 351 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ATP6V1E2Q96A05 226 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ROPN1LQ96C74 230 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SLC2A11Q9BYW1 496 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 Q9H521 79 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 LDAHQ9H6V9 325 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 NLE1Q9NVX2 485 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 TMEM161AQ9NX61 479 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 GTF2A1LQ9UNN4 478 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ACTL7AQ9Y615 435 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 AP4B1Q9Y6B7 739 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CASP8AP2Q9UKL3 1982 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 H3BML4 177 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 UBXN8O00124 270 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 TXNDC9O14530 226 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms