RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 HSPA4LO95757 839 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 RPN2P04844 631 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 CCR10P46092 362 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 NXPH1P58417 271 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 TEAD4Q15561 434 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 LPAL2Q16609 132 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 UAP1L1Q3KQV9 507 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 CCSMST1Q4G0I0 132 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 CAPRIN2Q6IMN6 1127 aaKnown RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 CPLX4Q7Z7G2 160 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 OR5AR1Q8NGP9 310 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 C20orf27Q9GZN8 174 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 DRC3Q9H069 523 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 NSRP1Q9H0G5 558 aaKnown RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 TMEM74BQ9NUR3 256 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 IMP3Q9NV31 184 aaKnown RBP21.32■■□□□ 1
HOXA4-201ENST00000360046 PSD3Q9NYI0 1048 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 TBC1D29Q9UFV1 150 aa21.32■■□□□ 1
HOXA4-201ENST00000360046 LAMA1P25391 3075 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 A0A1B0GTW7 788 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 EDF1O60869 148 aaKnown RBP21.31■■□□□ 1
HOXA4-201ENST00000360046 HALP42357 657 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 OCRLQ01968 901 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 UNC50Q53HI1 259 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 CDKL4Q5MAI5 379 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 DUS1LQ6P1R4 473 aaKnown RBP21.31■■□□□ 1
HOXA4-201ENST00000360046 TTC23LQ6PF05 361 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 INSM2Q96T92 566 aaPredicted RBP21.31■■□□□ 1
HOXA4-201ENST00000360046 GSDMCQ9BYG8 508 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 PTBP2Q9UKA9 531 aaKnown RBP21.31■■□□□ 1
HOXA4-201ENST00000360046 TNPO3Q9Y5L0 923 aaKnown RBP21.31■■□□□ 1
HOXA4-201ENST00000360046 VPS13AQ96RL7 3174 aa21.31■■□□□ 1
HOXA4-201ENST00000360046 PRR5-ARHGAP8B1AHC4 643 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 TAPBPO15533 448 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 NPHS1O60500 1241 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 ARRB2P32121 409 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 HSPA7P48741 367 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 NUBP1P53384 320 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 CLCA4Q14CN2 919 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 PRRT3Q5FWE3 981 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 ANKS6Q68DC2 871 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 FRMD7Q6ZUT3 714 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 NRROSQ86YC3 692 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 DCUN1D3Q8IWE4 304 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 TCAIMQ8N3R3 496 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 FBXO15Q8NCQ5 510 aaPredicted RBP21.3■■□□□ 1
HOXA4-201ENST00000360046 MAGEC3Q8TD91 643 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 GPBAR1Q8TDU6 330 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 CNDP1Q96KN2 507 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 CCDC138Q96M89 665 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 C7orf26Q96N11 449 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 PKP4Q99569 1192 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 TMEM79Q9BSE2 394 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 TRIT1Q9H3H1 467 aaKnown RBP21.3■■□□□ 1
HOXA4-201ENST00000360046 GSTO2Q9H4Y5 243 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 SUSD2Q9UGT4 822 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 TDRKHQ9Y2W6 561 aaKnown RBP21.3■■□□□ 1
HOXA4-201ENST00000360046 ASB1Q9Y576 335 aa21.3■■□□□ 1
HOXA4-201ENST00000360046 OR52A4PA6NMU1 304 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 CSF2P04141 144 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 CHRNGP07510 517 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 RPS17P08708 135 aaKnown RBP21.29■■□□□ 1
HOXA4-201ENST00000360046 NME1P15531 152 aaKnown RBP21.29■■□□□ 1
HOXA4-201ENST00000360046 DRD4P21917 467 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 HNMTP50135 292 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 C1orf61Q13536 156 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 ARL13AQ5H913 290 aaPredicted RBP21.29■■□□□ 1
HOXA4-201ENST00000360046 TAF8Q7Z7C8 310 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 OR5K2Q8NHB8 316 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 NSUN5Q96P11 429 aaKnown RBP21.29■■□□□ 1
HOXA4-201ENST00000360046 FERD3LQ96RJ6 166 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 SHCBP1LQ9BZQ2 653 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 PILRBQ9UKJ0 227 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 R4GN57 208 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 A0A1B0GVT2 93 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 CCNT2O60583 730 aaKnown RBP21.29■■□□□ 1
HOXA4-201ENST00000360046 CELA2BP08218 269 aaPredicted RBP21.29■■□□□ 1
HOXA4-201ENST00000360046 TSPAN8P19075 237 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 SERPINB5P36952 375 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 CDH13P55290 713 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 PRKG2Q13237 762 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 KRT33BQ14525 404 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 PCBP2Q15366 365 aaKnown RBP eCLIP21.29■■□□□ 14e-6■■■■■ 35.1
HOXA4-201ENST00000360046 PRAMEF14Q5SWL7 426 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 CRLF3Q8IUI8 442 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 SYT12Q8IV01 421 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 ATL1Q8WXF7 558 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 FBXL8Q96CD0 374 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 CCT8L2Q96SF2 557 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 SORT1Q99523 831 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 HGH1Q9BTY7 390 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 LRRC61Q9BV99 259 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 CD244Q9BZW8 370 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 SCHIP1Q9P0W5 487 aaPredicted RBP21.29■■□□□ 1
HOXA4-201ENST00000360046 PCTPQ9UKL6 214 aa21.29■■□□□ 1
HOXA4-201ENST00000360046 MYO1CO00159 1063 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 EML2O95834 649 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 SLC16A8O95907 504 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 GDF5P43026 501 aa21.28■■□□□ 1
HOXA4-201ENST00000360046 SF3A3Q12874 501 aaKnown RBP eCLIP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms