RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ARL8BQ9NVJ2 186 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 SPATA6Q9NWH7 488 aaPredicted RBP13.18□□□□□ -0.3
CCDC197-201ENST00000359253 SERGEFQ9UGK8 458 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 TRPS1Q9UHF7 1281 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 ACSL5Q9ULC5 683 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 DNAJC15Q9Y5T4 150 aa13.18□□□□□ -0.3
CCDC197-201ENST00000359253 LRRK1Q38SD2 2015 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 LRRC14BA6NHZ5 514 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 TMEM233B4DJY2 109 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 E9PBE3 544 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 UBDO15205 165 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 CCNT2O60583 730 aaKnown RBP13.17□□□□□ -0.3
CCDC197-201ENST00000359253 KLHL41O60662 606 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 UGDHO60701 494 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 CBX6O95503 412 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 PAK4O96013 591 aaPredicted RBP13.17□□□□□ -0.3
CCDC197-201ENST00000359253 IGLV3-19P01714 112 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 NQO1P15559 274 aaKnown RBP13.17□□□□□ -0.3
CCDC197-201ENST00000359253 KELP23276 732 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 OXTRP30559 389 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 HSPA7P48741 367 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 MRPL19P49406 292 aaKnown RBP13.17□□□□□ -0.3
CCDC197-201ENST00000359253 PCDH1Q08174 1060 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 DMPKQ09013 629 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 KLF10Q13118 480 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 GAS6Q14393 721 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 SQLEQ14534 574 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 INPP5AQ14642 412 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 IRF4Q15306 451 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 GGTA1PQ4G0N0 100 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 DNAL1Q4LDG9 190 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 ZNF648Q5T619 568 aaPredicted RBP13.17□□□□□ -0.3
CCDC197-201ENST00000359253 OGFOD2Q6N063 350 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 RPS27LQ71UM5 84 aaKnown RBP13.17□□□□□ -0.3
CCDC197-201ENST00000359253 SYVN1Q86TM6 617 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 VRK3Q8IV63 474 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 PELI3Q8N2H9 469 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 SLC7A6OSQ96CW6 309 aaPredicted RBP13.17□□□□□ -0.3
CCDC197-201ENST00000359253 TMEM79Q9BSE2 394 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 TIMM29Q9BSF4 260 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 SLC29A3Q9BZD2 475 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 BTBD1Q9H0C5 482 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 ZNF385DQ9H6B1 395 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 ARMCX1Q9P291 453 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 HCN4Q9Y3Q4 1203 aa13.17□□□□□ -0.3
CCDC197-201ENST00000359253 CACNB4O00305 520 aaPredicted RBP13.16□□□□□ -0.3
CCDC197-201ENST00000359253 OR7A17O14581 309 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 GYG2O15488 501 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 SKAP2O75563 359 aaPredicted RBP13.16□□□□□ -0.3
CCDC197-201ENST00000359253 HGFP14210 728 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 LBPP18428 481 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 TSPAN8P19075 237 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 HMOX2P30519 316 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 HSD17B2P37059 387 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 ACADVLP49748 655 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 ERVPABLB-1P60509 514 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 ABRQ12979 859 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 UBAP2LQ14157 1087 aaKnown RBP13.16□□□□□ -0.3
CCDC197-201ENST00000359253 NAA25Q14CX7 972 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 GSTA3Q16772 222 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 CLEC6AQ6EIG7 209 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 C11orf96Q7Z7L8 435 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 TREML1Q86YW5 311 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 ZNF547Q8IVP9 402 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 METTL6Q8TCB7 284 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 NAT14Q8WUY8 206 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 NELL1Q92832 810 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 RASSF4Q9H2L5 321 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 PRMT8Q9NR22 394 aaPredicted RBP13.16□□□□□ -0.3
CCDC197-201ENST00000359253 KLC4Q9NSK0 619 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 DNAJC11Q9NVH1 559 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 NDE1Q9NXR1 346 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 TSR3Q9UJK0 312 aaKnown RBP13.16□□□□□ -0.3
CCDC197-201ENST00000359253 SLC17A4Q9Y2C5 497 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 FIS1Q9Y3D6 152 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 ST14Q9Y5Y6 855 aa13.16□□□□□ -0.3
CCDC197-201ENST00000359253 TCRBV21S2A2A0A5A6 115 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 SERTM1A2A2V5 107 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 TMEM202A6NGA9 273 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 ZNF839A8K0R7 811 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 B2RBV5 119 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 ANKRD65E5RJM6 399 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 SLC28A1O00337 649 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 PPP6CO00743 305 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 FPGTO14772 594 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 PIP5K1BO14986 540 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 OR4F21O95013 312 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 CLDN9O95484 217 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 C1orf105O95561 183 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 NDUFV2P19404 249 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 CCND1P24385 295 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 KIAA1024LP59773 190 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 STX1BP61266 288 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 YPEL5P62699 121 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 TRAF3Q13114 568 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 FGL2Q14314 439 aa13.15□□□□□ -0.3
CCDC197-201ENST00000359253 ANGPT1Q15389 498 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms