RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 HAS3O00219 553 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 SLC30A4O14863 429 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 NME6O75414 186 aaPredicted RBP13.46□□□□□ -0.25
VCP-201ENST00000358901 MTX2O75431 263 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 WASP42768 502 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 ACLYP53396 1101 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 RHAGQ02094 409 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 LAPTM5Q13571 262 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 PLPP4Q5VZY2 271 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 TNFAIP8L2Q6P589 184 aaPredicted RBP13.46□□□□□ -0.25
VCP-201ENST00000358901 CCDC80Q76M96 950 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 FAM220AQ7Z4H9 259 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 BEND7Q8N7W2 519 aaPredicted RBP13.46□□□□□ -0.25
VCP-201ENST00000358901 OR4F6Q8NGB9 312 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 PLD4Q96BZ4 506 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 BIRC7Q96CA5 298 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 SUSD3Q96L08 255 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 ZNF778Q96MU6 729 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 ZNF599Q96NL3 588 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 VRTNQ9H8Y1 702 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 GIN1Q9NXP7 522 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 FAM86C2PA6NEL3 165 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 ANKRD66B4E2M5 251 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 SDHDO14521 159 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 HTRA2O43464 458 aaPredicted RBP13.46□□□□□ -0.25
VCP-201ENST00000358901 FAM189A1O60320 539 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 KLHL18O94889 574 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 DHFRP00374 187 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 ZBTB48P10074 688 aaPredicted RBP13.46□□□□□ -0.25
VCP-201ENST00000358901 PRPS1L1P21108 318 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 HTR1BP28222 390 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 RNASE12Q5GAN4 147 aaKnown RBP13.46□□□□□ -0.25
VCP-201ENST00000358901 OR4F3Q6IEY1 312 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 USP30Q70CQ3 517 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 ASRGL1Q7L266 308 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 NPAS4Q8IUM7 802 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 STON2Q8WXE9 905 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 BRI3BPQ8WY22 251 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 NSUN3Q9H649 340 aaKnown RBP13.46□□□□□ -0.25
VCP-201ENST00000358901 TBC1D14Q9P2M4 693 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 ADAMTS6Q9UKP5 1117 aa13.46□□□□□ -0.25
VCP-201ENST00000358901 TRBV23OR9-2A0A075B6M9 112 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 LCHNA4D1U4 455 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 FAM47E-STBD1D6RA91 191 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 CCL16O15467 120 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 DIRAS1O95057 198 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 CYP11A1P05108 521 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 FAM163BP0C2L3 166 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 LINGO3P0C6S8 592 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 STC1P52823 247 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 SCN1BQ07699 218 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 PCDH1Q08174 1060 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 DSC3Q14574 896 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 GPR33Q49SQ1 333 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 SPANXN4Q5MJ08 99 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 FAM92BQ6ZTR7 304 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 KLHL23Q8NBE8 558 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 C12orf43Q96C57 262 aaKnown RBP13.46□□□□□ -0.26
VCP-201ENST00000358901 CNPPD1Q9BV87 410 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 STRA6Q9BX79 667 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 OXCT2Q9BYC2 517 aaPredicted RBP13.46□□□□□ -0.26
VCP-201ENST00000358901 MTRRQ9UBK8 725 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 A0A0U1RQF3 1178 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 UBE2QL1A1L167 161 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 ZNF487B1APH4 448 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.26
VCP-201ENST00000358901 ADH1CP00326 375 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 OPN1SWP03999 348 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 PRKACGP22612 351 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 CSKP41240 450 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 NOGQ13253 232 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 CEACAM7Q14002 265 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 KIAA1191Q96A73 305 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 HEPHQ9BQS7 1158 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 TRIM8Q9BZR9 551 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 ABCB8Q9NUT2 735 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 PCDHGB3Q9Y5G1 929 aa13.46□□□□□ -0.26
VCP-201ENST00000358901 PGRP06401 933 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 PCSK2P16519 638 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 PLA2G16P53816 162 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 HEPACAMQ14CZ8 416 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 HKDC1Q2TB90 917 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 CLIP4Q8N3C7 705 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 C2CD4AQ8NCU7 369 aaPredicted RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 FCRL4Q96PJ5 515 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 KCNS3Q9BQ31 491 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 TVP23BQ9NYZ1 205 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 TRPS1Q9UHF7 1281 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 PARP4Q9UKK3 1724 aaKnown RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3DA0A087WVF3 549 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3IA0A087WXS9 549 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3EA0A087X179 549 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3KA0A087X1G2 549 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 ABHD14A-ACY1A0A1B0GW23 586 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 ILVBLA1L0T0 632 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3FA6NER0 549 aaPredicted RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 TBC1D3LB9A6J9 549 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 BHMG1C9JSJ3 638 aaPredicted RBP13.45□□□□□ -0.26
VCP-201ENST00000358901 PIRO00625 290 aa13.45□□□□□ -0.26
VCP-201ENST00000358901 RPLP0P05388 317 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms