RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RGRP47804 291 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 RPL34P49207 117 aaKnown RBP6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SERINC3Q13530 473 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 TP53BP2Q13625 1128 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 CDH18Q13634 790 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PON2Q15165 354 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 MED22Q15528 200 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 PARP15Q460N3 678 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 CYP27C1Q4G0S4 372 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SPANXN2Q5MJ10 180 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 OR4F3Q6IEY1 312 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 VTCN1Q7Z7D3 282 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 RHEBL1Q8TAI7 183 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 UBE2FQ969M7 185 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 KCNS3Q9BQ31 491 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 YIPF2Q9BWQ6 316 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 DCSTAMPQ9H295 470 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF556Q9HAH1 456 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 SPASTQ9UBP0 616 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF232Q9UNY5 417 aa6.45□□□□□ -1.38
CSDE1-203ENST00000358528 MYO10Q9HD67 2058 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 PDZK1P1A8MUH7 402 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF701M0R085 212 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 CCNKO75909 580 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 MED26O95402 600 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 PRAMEF1O95521 474 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 OXSR1O95747 527 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 B3GALT4O96024 378 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 SLC26A3P40879 764 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 EMX1Q04741 257 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 MAD2L1Q13257 205 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 SERPINA9Q86WD7 417 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ZNF280BQ86YH2 543 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ALDH16A1Q8IZ83 802 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ARRDC2Q8TBH0 407 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 NETO1Q8TDF5 533 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 DACT3Q96B18 629 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 DPH2Q9BQC3 489 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 TUBA1CQ9BQE3 449 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 RHNO1Q9BSD3 238 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 KAT8Q9H7Z6 458 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 INIPQ9NRY2 104 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 C1orf109Q9NX04 203 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 A6NL46 340 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 WDR47O94967 919 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 SCELO95171 688 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 EPN2O95208 641 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 VIPP01282 170 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 CHRNA1P02708 482 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ATXN1LP0C7T5 689 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 GGT1P19440 569 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 PBLDP30039 288 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 RCVRNP35243 200 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 DCTP40126 519 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 NR4A2P43354 598 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 PSMD8P48556 350 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 PRIM2P49643 509 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 MLLT10P55197 1068 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 RPS14P62263 151 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ADARB1P78563 741 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ILF2Q12905 390 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 AQP6Q13520 282 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 TAB1Q15750 504 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 CTU2Q2VPK5 515 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 GDF6Q6KF10 455 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 Q6ZSR9 355 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 UMODL1-AS1Q8N2C9 162 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 TTC30BQ8N4P2 665 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 KLHDC9Q8NEP7 349 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 CHPT1Q8WUD6 406 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 BRI3BPQ8WY22 251 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 SMAD5Q99717 465 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 COPS4Q9BT78 406 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 AMBRA1Q9C0C7 1298 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 TMEM161AQ9NX61 479 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 POU2F3Q9UKI9 436 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 FAM32AQ9Y421 112 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ASPDHA6ND91 283 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ALOX5P09917 674 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 RPL17P18621 184 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 MZF1P28698 734 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 CRATP43155 626 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 RPS3AP61247 264 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ZXDBP98169 803 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 CBLBQ13191 982 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 TUBA3CQ13748 450 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 TTLL9Q3SXZ7 439 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 ARMC4Q5T2S8 1044 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 RBM23Q86U06 439 aaKnown RBP6.44□□□□□ -1.38
CSDE1-203ENST00000358528 RGL4Q8IZJ4 473 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 SVOPLQ8N434 492 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 AADATQ8N5Z0 425 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 AMER2Q8N7J2 671 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 LGALS12Q96DT0 336 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 CSF3RQ99062 836 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 RTP3Q9BQQ7 232 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 NEURL2Q9BR09 285 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 BOCQ9BWV1 1114 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 TMEM248Q9NWD8 314 aa6.44□□□□□ -1.38
CSDE1-203ENST00000358528 KCNH4Q9UQ05 1017 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms