RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CAPZA2P47755 286 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 DEFA1P59665 94 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 DEFA3P59666 94 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 SNRPFP62306 86 aaKnown RBP9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 RPL7AP62424 266 aaKnown RBP9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 RGS1Q08116 209 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 PCDH1Q08174 1060 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 POU4F3Q15319 338 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 PPM1JQ5JR12 505 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 C6orf141Q5SZD1 244 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 PDSS1Q5T2R2 415 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 CES5AQ6NT32 575 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 LAYNQ6UX15 382 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 COMMD7Q86VX2 200 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 ZSWIM9Q86XI8 627 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 EMC1Q8N766 993 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 OR8H1Q8NGG4 311 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 GOT1L1Q8NHS2 421 aaPredicted RBP9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 KLHL6Q8WZ60 621 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 ATOH1Q92858 354 aaPredicted RBP9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 UFD1Q92890 307 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 PHF21AQ96BD5 680 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 PTERQ96BW5 349 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 BCL7BQ9BQE9 202 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 NIF3L1Q9GZT8 377 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 MMP27Q9H306 513 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 PRDM12Q9H4Q4 367 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 CCDC59Q9P031 241 aaKnown RBP9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 PDE10AQ9Y233 779 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 NAALAD2Q9Y3Q0 740 aa9.14□□□□□ -0.95
SMARCAL1-202ENST00000358207 PIPSLA2A3N6 862 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 EPOPA6NHQ4 379 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 H0YAE9 185 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 FZD6O60353 706 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 GMDSO60547 372 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 HSPA4LO95757 839 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 C1RP00736 705 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 MT-ND1P03886 318 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 CCNYL3P0C7X3 344 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 HSMCR30P0CW71 290 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 CPB1P15086 417 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ASPAP45381 313 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 NSFP46459 744 aaKnown RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 BAMBIQ13145 260 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 CYP27C1Q4G0S4 372 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 SETMARQ53H47 684 aaPredicted RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 PYCR3Q53H96 274 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 NOTUMQ6P988 496 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 SLC27A1Q6PCB7 646 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 PAMR1Q6UXH9 720 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 SPOCD1Q6ZMY3 1216 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 THAP5Q7Z6K1 395 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 OR6B3Q8NGW1 331 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 OR6P1Q8NGX9 317 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 TEX47Q8TBZ9 253 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 SLC45A3Q96JT2 553 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 TNIP3Q96KP6 325 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 UBXN10Q96LJ8 280 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ZNF416Q9BWM5 594 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 CCDC90BQ9GZT6 254 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 TMEM168Q9H0V1 697 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 CACNA2D2Q9NY47 1150 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 KLHL42Q9P2K6 505 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 VCANP13611 3396 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 hCG_1818297A0A087WSY0 165 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 M0QZ92 97 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 GRID2O43424 1007 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 LRCH4O75427 683 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 DNTTP04053 509 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 UNGP13051 313 aaPredicted RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ARSAP15289 507 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 HOXA1P49639 335 aaPredicted RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 DYNLT1P63172 113 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 DGCR6Q14129 220 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 STXBP5Q5T5C0 1151 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ALG1LQ6GMV1 187 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 DENND1BQ6P3S1 775 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 FAM35AQ86V20 835 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 TRIM48Q8IWZ4 208 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 OR8H3Q8N146 312 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ACTL9Q8TC94 416 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ADAMTS19Q8TE59 1207 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 SMG7Q92540 1137 aaKnown RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 AHCYL2Q96HN2 611 aaKnown RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 MAGEB10Q96LZ2 347 aaPredicted RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 NODALQ96S42 347 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 MRPL45Q9BRJ2 306 aaKnown RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 NAT9Q9BTE0 207 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 FTHL17Q9BXU8 183 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ESRP2Q9H6T0 727 aaKnown RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 POPDC2Q9HBU9 364 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ZBTB20Q9HC78 741 aaPredicted RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 ERVK13-1Q9NX77 482 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 SARDHQ9UL12 918 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 MAGED1Q9Y5V3 778 aaPredicted RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 SMIM35A0A1B0GVV1 85 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 CCDC78A2IDD5 438 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 GRXCR1A8MXD5 290 aa9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 TRDMT1O14717 391 aaKnown RBP9.13□□□□□ -0.95
SMARCAL1-202ENST00000358207 TSC22D2O75157 780 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms