RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 BNIP3LO60238 219 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 IGFALSP35858 605 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 LBHQ53QV2 105 aaPredicted RBP7.9□□□□□ -1.15
HTT-201ENST00000355072 GCNT6Q5T4J0 391 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 FAM69AQ5T7M9 428 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 LRRC52Q8N7C0 313 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 KCTD13Q8WZ19 329 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 BTN2A3PQ96KV6 586 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 CDADC1Q9BWV3 514 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 FTHL17Q9BXU8 183 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 GAREM1Q9H706 876 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 FKBPLQ9UIM3 349 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 JAG2Q9Y219 1238 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 PCP4L1A6NKN8 68 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 E2F3O00716 465 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 ESR1P03372 595 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 ZNF182P17025 639 aaPredicted RBP7.9□□□□□ -1.15
HTT-201ENST00000355072 ACVR2AP27037 513 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 PRMT2P55345 433 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 CACNG1Q06432 222 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 PNCKQ6P2M8 343 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 VMP1Q96GC9 406 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 SSX3Q99909 188 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 SLC29A3Q9BZD2 475 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 SMURF1Q9HCE7 757 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 FAM120CQ9NX05 1096 aaKnown RBP7.9□□□□□ -1.15
HTT-201ENST00000355072 RBMXL2O75526 392 aaKnown RBP7.9□□□□□ -1.15
HTT-201ENST00000355072 TRBC1P01850 177 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 RPS5P46782 204 aaKnown RBP7.9□□□□□ -1.15
HTT-201ENST00000355072 PTPN5P54829 565 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 UBXN2AP68543 259 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 MTMR2Q13614 643 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 WDR45BQ5MNZ6 344 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 PRELID2Q8N945 189 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 OR1J4Q8NGS1 313 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 DPF2Q92785 391 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 CNTN6Q9UQ52 1028 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 TO15178 435 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 LINGO2Q7L985 606 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 GALNT13Q8IUC8 556 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 RCN3Q96D15 328 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 PHF21BQ96EK2 531 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 POLR2J2Q9GZM3 115 aaKnown RBP7.9□□□□□ -1.15
HTT-201ENST00000355072 TRPV4Q9HBA0 871 aa7.9□□□□□ -1.15
HTT-201ENST00000355072 PDHA2P29803 388 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 ARF5P84085 180 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 UAP1L1Q3KQV9 507 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CUZD1Q86UP6 607 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 SLC5A5Q92911 643 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 FAIMQ9NVQ4 179 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 SNX10Q9Y5X0 201 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 PRRC2BQ5JSZ5 2229 aaKnown RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 STK16O75716 305 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CPSF4O95639 269 aaKnown RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 AP2A1O95782 977 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CERS1P27544 350 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CSTF2P33240 577 aaKnown RBP eCLIP7.89□□□□□ -1.15
HTT-201ENST00000355072 RBBP4Q09028 425 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 WDR53Q7Z5U6 358 aaPredicted RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 ZNF431Q8TF32 576 aaPredicted RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 ST6GALNAC4Q9H4F1 302 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 HEBP1Q9NRV9 189 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 TNFRSF11BO00300 401 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CKBP12277 381 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CXCR4P61073 352 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 SP140Q13342 867 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 MAPK14Q16539 360 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 PLA2G4EQ3MJ16 856 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 LPCAT3Q6P1A2 487 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 GFM1Q96RP9 751 aaKnown RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 POPDC3Q9HBV1 291 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 SLC22A11Q9NSA0 550 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CACFD1Q9UGQ2 172 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 EDARQ9UNE0 448 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 PTCH2Q9Y6C5 1203 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 M6PRP20645 277 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 PRDX5P30044 214 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 SEPHS1P49903 392 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CSTF1Q05048 431 aaKnown RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 CAPN13Q6MZZ7 669 aaPredicted RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 METAP1DQ6UB28 335 aaPredicted RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 TSPYL5Q86VY4 417 aaPredicted RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 KLHDC8BQ8IXV7 354 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 POC1BQ8TC44 478 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 CXorf40BQ96DE9 158 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 APBA2Q99767 749 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 PUS3Q9BZE2 481 aaKnown RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 ITM2CQ9NQX7 267 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 RBM22Q9NW64 420 aaKnown RBP eCLIP7.89□□□□□ -1.151e-7■■■■■ 30.3
HTT-201ENST00000355072 DNMT3LQ9UJW3 386 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 L7N2F9 121 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 MITFO75030 526 aaPredicted RBP7.89□□□□□ -1.15
HTT-201ENST00000355072 FPR1P21462 350 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 HCAR3P49019 387 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 NOMO3P69849 1222 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 SLC25A3Q00325 362 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 GSTM4Q03013 218 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 NOMO1Q15155 1222 aa7.89□□□□□ -1.15
HTT-201ENST00000355072 KCNIP4Q6PIL6 250 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms