RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 OXR1Q8N573 874 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 TRAM1L1Q8N609 369 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 JPH3Q8WXH2 748 aaPredicted RBP9.52□□□□□ -0.89
GABPA-201ENST00000354828 RGMAQ96B86 450 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 ZHX1-C8orf76Q96EF9 292 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 DEPDC7Q96QD5 511 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 ZBP1Q9H171 429 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 SLC22A14Q9Y267 594 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 OR1A2Q9Y585 309 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 CAPN14A8MX76 684 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 TK2O00142 265 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 CDC7O00311 574 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 SMNDC1O75940 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
GABPA-201ENST00000354828 NUDT17P0C025 328 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 TNFRSF4P43489 277 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 MRPS22P82650 360 aaKnown RBP9.52□□□□□ -0.89
GABPA-201ENST00000354828 C16orf72Q14CZ0 275 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 MLF2Q15773 248 aaPredicted RBP9.52□□□□□ -0.89
GABPA-201ENST00000354828 TOR1AIP1Q5JTV8 583 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 ZYG11AQ6WRX3 759 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 ADHFE1Q8IWW8 467 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 CHST14Q8NCH0 376 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 OR10H5Q8NGA6 315 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 CKAP2Q8WWK9 683 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 KCNH6Q9H252 994 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 TMEM59LQ9UK28 342 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 PLLPQ9Y342 182 aa9.52□□□□□ -0.89
GABPA-201ENST00000354828 UBR3Q6ZT12 1888 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 A0A0J9YYE9 177 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 SUV39H1O43463 412 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 TMEM63AO94886 807 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 AP2A2O94973 939 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 OAS1P00973 400 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 GJA4P35212 333 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 RPS15P62841 145 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 OLIG2Q13516 323 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 DHDDSQ86SQ9 333 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 MFSD6LQ8IWD5 586 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 TMEFF1Q8IYR6 380 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 FSTL5Q8N475 847 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 RNF31Q96EP0 1072 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 TBL1XR1Q9BZK7 514 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 NEK6Q9HC98 313 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 MAGEE1Q9HCI5 957 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 PAK6Q9NQU5 681 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 PDPK1O15530 556 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 TRAPPC6AO75865 159 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 EPOP01588 193 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 EFNA1P20827 205 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 MPIP34949 423 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 SLC6A11P48066 632 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 WNT7BP56706 349 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 PSME3P61289 254 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 NCEH1Q6PIU2 408 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 SUSD1Q6UWL2 747 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 OR9A1PQ8NGU1 263 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 NXPE3Q969Y0 559 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 GFM1Q96RP9 751 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 FIZ1Q96SL8 496 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 PHF7Q9BWX1 381 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 TFB2MQ9H5Q4 396 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 NOL6Q9H6R4 1146 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 WDR55Q9H6Y2 383 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 USP29Q9HBJ7 922 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 TBX21Q9UL17 535 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 RUVBL1Q9Y265 456 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 IL6P05231 212 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 CBSLP0DN79 551 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 MYL12AP19105 171 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 ATP5A1P25705 553 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 CBSP35520 551 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 RGS8P57771 180 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 LHX8Q68G74 356 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 B3GNT9Q6UX72 402 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 RTL4Q6ZR62 310 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 PQLC3Q8N755 202 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 DDX1Q92499 740 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 RIT1Q92963 219 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 CENPTQ96BT3 561 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 MMABQ96EY8 250 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 CPEB1Q9BZB8 566 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 ZNF334Q9HCZ1 680 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 RARRES3Q9UL19 164 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 ZBTB42B2RXF5 422 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 PRAMEF26H0Y7S4 382 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 FAM20BO75063 409 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 OR6B1O95007 311 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 SRCP12931 536 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 DPP6P42658 865 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 IDH2P48735 452 aaKnown RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 NCBP2P52298 156 aaKnown RBP eCLIP9.51□□□□□ -0.89
GABPA-201ENST00000354828 CASP9P55211 416 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 VSX2P58304 361 aaPredicted RBP9.51□□□□□ -0.89
GABPA-201ENST00000354828 DSC3Q14574 896 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 EXOC3L1Q86VI1 746 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 PLXDC1Q8IUK5 500 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 OFCC1Q8IZS5 231 aa9.51□□□□□ -0.89
GABPA-201ENST00000354828 AADATQ8N5Z0 425 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms