RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 UBE2UQ5VVX9 321 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 RSBN1Q5VWQ0 802 aaPredicted RBP13.61□□□□□ -0.23
LRP8-203ENST00000354412 AGMOQ6ZNB7 445 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 GALNT5Q7Z7M9 940 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 HEATR4Q86WZ0 1026 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 CLIP4Q8N3C7 705 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 ZFP42Q96MM3 310 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 SERPINB11Q96P15 392 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 GAD1Q99259 594 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 ACBD6Q9BR61 282 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 ZYG11BQ9C0D3 744 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 C6orf62Q9GZU0 229 aaPredicted RBP13.61□□□□□ -0.23
LRP8-203ENST00000354412 OPTCQ9UBM4 332 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 NEUROG3Q9Y4Z2 214 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 PNMA8CA0A1B0GUJ8 204 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 ANKRD34BA5PLL1 514 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 METTL15A6NJ78 407 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 FAM220BPB1ANY3 271 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 SLC2A4P14672 509 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 IL1RL1Q01638 556 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 IHHQ14623 411 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 PTPRCAPQ14761 206 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 RFTN2Q52LD8 501 aaPredicted RBP13.61□□□□□ -0.23
LRP8-203ENST00000354412 COLEC12Q5KU26 742 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 LETMD1Q6P1Q0 360 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 AFTPHQ6ULP2 937 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 GCNT7Q6ZNI0 430 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 CYP4Z1Q86W10 505 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 OR52B6Q8NGF0 335 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 TMEM40Q8WWA1 233 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 RPL3LQ92901 407 aaKnown RBP13.61□□□□□ -0.23
LRP8-203ENST00000354412 PSMG2Q969U7 264 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 SEMA3CQ99985 751 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 DPY30Q9C005 99 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 TRMT6Q9UJA5 497 aaKnown RBP13.61□□□□□ -0.23
LRP8-203ENST00000354412 MKLN1Q9UL63 735 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 MED16Q9Y2X0 877 aa13.61□□□□□ -0.23
LRP8-203ENST00000354412 MRPL42Q9Y6G3 142 aaKnown RBP13.61□□□□□ -0.23
LRP8-203ENST00000354412 TBKBP1A7MCY6 615 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 IDH3BO43837 385 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 SNX4O95219 450 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 HAPLN1P10915 354 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 EFNA1P20827 205 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 CD9P21926 228 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 IGFBP6P24592 240 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 BMPR1AP36894 532 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 NKX2-5P52952 324 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 DMPKQ09013 629 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 PTPRNQ16849 979 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 FAM174BQ3ZCQ3 159 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 KDM4DQ6B0I6 523 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 DESI1Q6ICB0 168 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 CES5AQ6NT32 575 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 FAM171BQ6P995 826 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 METTL23Q86XA0 190 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 ZDHHC21Q8IVQ6 265 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 HOMEZQ8IX15 550 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 DCBLD1Q8N8Z6 715 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 TTC29Q8NA56 475 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 SCAMP5Q8TAC9 235 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 ATL1Q8WXF7 558 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 ESAMQ96AP7 390 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 FAM120BQ96EK7 910 aaKnown RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 CDK15Q96Q40 435 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 TM9SF3Q9HD45 589 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 TMEM248Q9NWD8 314 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 SAMD4AQ9UPU9 718 aaKnown RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 HAT1O14929 419 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 RGS14O43566 566 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 MITFO75030 526 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 OTCP00480 354 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 PGRP06401 933 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 THP07101 528 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 TGFBR2P37173 567 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 MAGEA2P43356 314 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 CLK3P49761 638 aaKnown RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 IL10RBQ08334 325 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 MAD2L1BPQ15013 274 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 MORN1Q5T089 497 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.6□□□□□ -0.23
LRP8-203ENST00000354412 CACHD1Q5VU97 1274 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 CCBE1Q6UXH8 406 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 DNAJB3Q8WWF6 145 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 ITCHQ96J02 903 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 CLSTN3Q9BQT9 956 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 NLE1Q9NVX2 485 aaPredicted RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 C1orf109Q9NX04 203 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 NUDT4Q9NZJ9 180 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 ZNF221Q9UK13 617 aa13.6□□□□□ -0.23
LRP8-203ENST00000354412 NDRG4Q9ULP0 352 aaKnown RBP13.6□□□□□ -0.23
LRP8-203ENST00000354412 NYNRINQ9P2P1 1898 aaKnown RBP13.59□□□□□ -0.23
LRP8-203ENST00000354412 ERN1O75460 977 aaKnown RBP13.59□□□□□ -0.23
LRP8-203ENST00000354412 CLCNKBP51801 687 aa13.59□□□□□ -0.23
LRP8-203ENST00000354412 ARPC4P59998 168 aa13.59□□□□□ -0.23
LRP8-203ENST00000354412 GBX1Q14549 363 aa13.59□□□□□ -0.23
LRP8-203ENST00000354412 TAF1CQ15572 869 aaPredicted RBP13.59□□□□□ -0.23
LRP8-203ENST00000354412 AGAP6Q5VW22 663 aa13.59□□□□□ -0.23
LRP8-203ENST00000354412 OR2T5Q6IEZ7 315 aa13.59□□□□□ -0.23
LRP8-203ENST00000354412 SNX20Q7Z614 316 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms