RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 NRTNQ99748 197 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 TXLNGQ9NUQ3 528 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 IRAK4Q9NWZ3 460 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 ACSL5Q9ULC5 683 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 BTN3A3O00478 584 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 PPP1R12AO14974 1030 aaPredicted RBP15.29■□□□□ 0.04
DDX55-202ENST00000354291 KLHL18O94889 574 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 MT-CYBP00156 380 aaPredicted RBP15.29■□□□□ 0.04
DDX55-202ENST00000354291 SLC35G4P0C7Q5 338 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 ESRRAP11474 423 aaPredicted RBP15.29■□□□□ 0.04
DDX55-202ENST00000354291 CD99P14209 185 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 MMP11P24347 488 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 NDUFS1P28331 727 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 CA7P43166 264 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 ART1P52961 327 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 ARG2P78540 354 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 Q0VFX4 171 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 DEFB110Q30KQ9 67 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 LDLRAP1Q5SW96 308 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 CCDC70Q6NSX1 233 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 BZW1Q7L1Q6 419 aaKnown RBP15.29■□□□□ 0.04
DDX55-202ENST00000354291 NT5DC3Q86UY8 548 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 HOOK3Q86VS8 718 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 RFX6Q8HWS3 928 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 ZNF655Q8N720 491 aaPredicted RBP15.29■□□□□ 0.04
DDX55-202ENST00000354291 PROKR1Q8TCW9 393 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 MTFMTQ96DP5 389 aaKnown RBP15.29■□□□□ 0.04
DDX55-202ENST00000354291 C14orf79Q96F83 325 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 TRIB3Q96RU7 358 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 MCCC2Q9HCC0 563 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 FAM60AQ9NP50 221 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 SPO11Q9Y5K1 396 aa15.29■□□□□ 0.04
DDX55-202ENST00000354291 MGAT4DA6NG13 374 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 BTN3A1O00481 513 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 GPR39O43194 453 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 KRT1P04264 644 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 CTSBP07858 339 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 ALAS2P22557 587 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 NR2C2P49116 596 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 SMSP52788 366 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 CASP6P55212 293 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 ZBTB17Q13105 803 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 PPP2R5EQ16537 467 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 ACVR1CQ8NER5 493 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 NAT14Q8WUY8 206 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 RNF25Q96BH1 459 aaPredicted RBP15.28■□□□□ 0.04
DDX55-202ENST00000354291 OLFM3Q96PB7 478 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 FERD3LQ96RJ6 166 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 LMF1Q96S06 567 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 NDC1Q9BTX1 674 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 PITPNM3Q9BZ71 974 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 SLC25A51Q9H1U9 297 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 IL26Q9NPH9 171 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 PLA2G3Q9NZ20 509 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 SEC14L3Q9UDX4 400 aa15.28■□□□□ 0.04
DDX55-202ENST00000354291 SOCS6O14544 535 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 HCRTR1O43613 425 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 SPOPO43791 374 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 TNNT1P13805 278 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 COMTP21964 271 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 AKT1P31749 480 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 ADORA2A-AS1P86434 159 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 TBX2Q13207 712 aaPredicted RBP15.27■□□□□ 0.04
DDX55-202ENST00000354291 MFAP5Q13361 173 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 TFDP2Q14188 446 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 CDSNQ15517 529 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 SLC14A2Q15849 920 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 GPRC6AQ5T6X5 926 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 FAAH2Q6GMR7 532 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 KIRREL2Q6UWL6 708 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 FAM151BQ6UXP7 276 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 CFAP206Q8IYR0 622 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 NACC2Q96BF6 587 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 IMP4Q96G21 291 aaKnown RBP15.27■□□□□ 0.04
DDX55-202ENST00000354291 RMDN2Q96LZ7 410 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 CEP41Q9BYV8 373 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 HEBP2Q9Y5Z4 205 aa15.27■□□□□ 0.04
DDX55-202ENST00000354291 ACANP16112 2415 aa15.27■□□□□ 0.03
DDX55-202ENST00000354291 DYTNA2CJ06 578 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 C2orf74A8MZ97 194 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 ZSCAN9O15535 394 aaPredicted RBP15.26■□□□□ 0.03
DDX55-202ENST00000354291 MSH3P20585 1137 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 MST1P26927 711 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 HADHBP55084 474 aaKnown RBP15.26■□□□□ 0.03
DDX55-202ENST00000354291 DYNLT1P63172 113 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 RBPJQ06330 500 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.26■□□□□ 0.03
DDX55-202ENST00000354291 TEX44Q53QW1 395 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 MFSD7Q6UXD7 560 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 NPNTQ6UXI9 565 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 SHISA6Q6ZSJ9 500 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 TRIM73Q86UV7 250 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 OR2L2Q8NH16 312 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 RBM41Q96IZ5 413 aaKnown RBP15.26■□□□□ 0.03
DDX55-202ENST00000354291 SRPK1Q96SB4 655 aaKnown RBP15.26■□□□□ 0.03
DDX55-202ENST00000354291 TRIM56Q9BRZ2 755 aaKnown RBP15.26■□□□□ 0.03
DDX55-202ENST00000354291 TRIM5Q9C035 493 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 XKR8Q9H6D3 395 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 SEMA3GQ9NS98 782 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms