RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 A0A1W2PP55 124 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 MCIDASD6RGH6 385 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 PDPK1O15530 556 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 STATHP02808 62 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 EPCAMP16422 314 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 TPP2P29144 1249 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-201ENST00000353479 PGDP52209 483 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 FAM171BQ6P995 826 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 ZNF540Q8NDQ6 660 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 MRGPRX2Q96LB1 330 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 PSAT1Q9Y617 370 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 PAPSS2O95340 614 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-201ENST00000353479 PCYT1AP49585 367 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 ST13P50502 369 aaKnown RBP14.6□□□□□ -0.07
COL17A1-201ENST00000353479 TOP3AQ13472 1001 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-201ENST00000353479 HKDC1Q2TB90 917 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 ABRAXAS1Q6UWZ7 409 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 LRRC70Q7Z2Q7 622 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 NXPE1Q8N323 547 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 CADM2Q8N3J6 435 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 TRPV1Q8NER1 839 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 ADCY4Q8NFM4 1077 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 OR4E2Q8NGC2 313 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 LMX1AQ8TE12 382 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 SLC13A3Q8WWT9 602 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 ZC4H2Q9NQZ6 224 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 SLCO3A1Q9UIG8 710 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 PLAGL1Q9UM63 463 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 CYP8B1Q9UNU6 501 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 K7ERQ8 282 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 KAT7O95251 611 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 PAK4O96013 591 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-201ENST00000353479 LAMP2P13473 410 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 AFF1P51825 1210 aaKnown RBP14.6□□□□□ -0.07
COL17A1-201ENST00000353479 SCAPQ12770 1279 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 BNIP1Q12981 228 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 KLHL12Q53G59 568 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 THOC6Q86W42 341 aaKnown RBP14.6□□□□□ -0.07
COL17A1-201ENST00000353479 APCDD1Q8J025 514 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 ANKLE1Q8NAG6 615 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 C2CD4AQ8NCU7 369 aaPredicted RBP14.6□□□□□ -0.07
COL17A1-201ENST00000353479 FAM13CQ8NE31 585 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 ZMIZ2Q8NF64 920 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 SLITRK2Q9H156 845 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 RAPGEFL1Q9UHV5 662 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 GRID2O43424 1007 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 GALNT18Q6P9A2 607 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 DDHD1Q8NEL9 900 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 DUSP26Q9BV47 211 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 STRCQ7RTU9 1775 aa14.6□□□□□ -0.07
COL17A1-201ENST00000353479 ADAMTS4O75173 837 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TOP3BO95985 862 aaKnown RBP14.59□□□□□ -0.07
COL17A1-201ENST00000353479 MT-ND1P03886 318 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 CHN2P52757 468 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TMEM115Q12893 351 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TMEM198Q66K66 360 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 UBR7Q8N806 425 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TTLQ8NG68 377 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 MYH8P13535 1937 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 PRG2P13727 222 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 PRDX6P30041 224 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 IGFALSP35858 605 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 CCDC103Q8IW40 242 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 SLC39A11Q8N1S5 342 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 NAT14Q8WUY8 206 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 MIEF2Q96C03 454 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 DPYSL5Q9BPU6 564 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 CXorf56Q9H5V9 222 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 ANKHQ9HCJ1 492 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 VPS29Q9UBQ0 182 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 A8MUI8 341 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TMEM233B4DJY2 109 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 AXIN1O15169 862 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 GSRP00390 522 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 RGS8P57771 180 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-201ENST00000353479 ERVK-8P63133 956 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 PDK3Q15120 406 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TRIM16LQ309B1 348 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 ZNF730Q6ZMV8 503 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 MBOAT1Q6ZNC8 495 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TAS1R1Q7RTX1 841 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 PQLC1Q8N2U9 271 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TMEM27Q9HBJ8 222 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 STRCP1A6NGW2 1772 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 LOC100506127A0A0U1RQW1 187 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 NDUFS4O43181 175 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 MLLT3P42568 568 aaPredicted RBP14.59□□□□□ -0.07
COL17A1-201ENST00000353479 SEMA3AQ14563 771 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 SMPDL3AQ92484 453 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 DERL2Q9GZP9 239 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 MAGEE1Q9HCI5 957 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TOR4AQ9NXH8 423 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 OR1I1O60431 355 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 NCK1P16333 377 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 VARSP26640 1264 aaKnown RBP14.59□□□□□ -0.07
COL17A1-201ENST00000353479 RYKP34925 604 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 FAM220AQ7Z4H9 259 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 NUDT13Q86X67 352 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TMEM25Q86YD3 366 aa14.59□□□□□ -0.07
COL17A1-201ENST00000353479 TP53INP2Q8IXH6 220 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms