RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ASIC4Q96FT7 647 aa21.64■■□□□ 1.05
UPF3A-201ENST00000351487 IKZF5Q9H5V7 419 aa21.64■■□□□ 1.05
UPF3A-201ENST00000351487 PAK6Q9NQU5 681 aaPredicted RBP21.64■■□□□ 1.05
UPF3A-201ENST00000351487 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.64■■□□□ 1.05
UPF3A-201ENST00000351487 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.64■■□□□ 1.05
UPF3A-201ENST00000351487 LHCGRP22888 699 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 CCR7P32248 378 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 RPIAP49247 311 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 STK19P49842 368 aaPredicted RBP21.63■■□□□ 1.05
UPF3A-201ENST00000351487 DAG1Q14118 895 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 ARHGEF6Q15052 776 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 ATP13A5Q4VNC0 1218 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 RUNDC3AQ59EK9 446 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 C22orf39Q6P5X5 142 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 FKBP9P1Q75LS8 142 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 TCAIMQ8N3R3 496 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 KRTCAP2Q8N6L1 136 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 OR10A6Q8NH74 314 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 ACPTQ9BZG2 426 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 SUV39H2Q9H5I1 410 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 PDE10AQ9Y233 779 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 H0Y858 1186 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 ALBP02768 609 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 ALPLP05186 524 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 CTSOP43234 321 aaPredicted RBP21.63■■□□□ 1.05
UPF3A-201ENST00000351487 PTSQ03393 145 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 ZDHHC20Q5W0Z9 365 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 GPR65Q8IYL9 337 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 FIG4Q92562 907 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 THUMPD3Q9BV44 507 aaKnown RBP21.63■■□□□ 1.05
UPF3A-201ENST00000351487 NPLQ9BXD5 320 aaPredicted RBP21.63■■□□□ 1.05
UPF3A-201ENST00000351487 CARS2Q9HA77 564 aaKnown RBP21.63■■□□□ 1.05
UPF3A-201ENST00000351487 TLR9Q9NR96 1032 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 ARL15Q9NXU5 204 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 ATXN10Q9UBB4 475 aa21.63■■□□□ 1.05
UPF3A-201ENST00000351487 HPRP00739 348 aa21.62■■□□□ 1.05
UPF3A-201ENST00000351487 BCKDHAP12694 445 aa21.62■■□□□ 1.05
UPF3A-201ENST00000351487 SGO1Q5FBB7 561 aa21.62■■□□□ 1.05
UPF3A-201ENST00000351487 OTUD3Q5T2D3 398 aaPredicted RBP21.62■■□□□ 1.05
UPF3A-201ENST00000351487 PLPP6Q8IY26 295 aa21.62■■□□□ 1.05
UPF3A-201ENST00000351487 SLC22A17Q8WUG5 538 aa21.62■■□□□ 1.05
UPF3A-201ENST00000351487 SLC12A9Q9BXP2 914 aa21.62■■□□□ 1.05
UPF3A-201ENST00000351487 CPEB1Q9BZB8 566 aaKnown RBP21.62■■□□□ 1.05
UPF3A-201ENST00000351487 SOX17Q9H6I2 414 aaPredicted RBP21.62■■□□□ 1.05
UPF3A-201ENST00000351487 ACTR8Q9H981 624 aa21.62■■□□□ 1.05
UPF3A-201ENST00000351487 PKD2L2Q9NZM6 624 aa21.62■■□□□ 1.05
UPF3A-201ENST00000351487 ELOVL7A1L3X0 281 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 LILRB3O75022 631 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 SCELO95171 688 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 PRPH2P23942 346 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 AOAHP28039 575 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 MTHFRP42898 656 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 NRIP1P48552 1158 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 SEMG2Q02383 582 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 CCNYL2Q5T2Q4 361 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 HS6ST3Q8IZP7 471 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 FAM86B1Q8N7N1 296 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 RDH12Q96NR8 316 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 DEFB118Q96PH6 123 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 OR52E6Q96RD3 313 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 OCEL1Q9H607 264 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 OGDHLQ9ULD0 1010 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 MAN2B2Q9Y2E5 1009 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 KCNE1BA0A087WTH5 132 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 TRAV19A0A0A6YYK7 116 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 CARNS1A5YM72 827 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 AREL1O15033 823 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 GSTA4O15217 222 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 NUAK1O60285 661 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 FKTNO75072 461 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 C8GP07360 202 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 OR56A5P0C7T3 313 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 CDK4P11802 303 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 TTKP33981 857 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 CLDN8P56748 225 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 RPS14P62263 151 aaKnown RBP21.61■■□□□ 1.05
UPF3A-201ENST00000351487 LRIF1Q5T3J3 769 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 ATG9BQ674R7 924 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 NECAB2Q7Z6G3 386 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 TMCO2Q7Z6W1 182 aaPredicted RBP21.61■■□□□ 1.05
UPF3A-201ENST00000351487 ISOC1Q96CN7 298 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 OSBPL6Q9BZF3 934 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 PARVBQ9HBI1 364 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 ADGRE2Q9UHX3 823 aa21.61■■□□□ 1.05
UPF3A-201ENST00000351487 NPIPB8E9PQR5 432 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 ERN1O75460 977 aaKnown RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 PDYNP01213 254 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 TCF3P15923 654 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 HLA-FP30511 346 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 NKG7Q16617 165 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 CPSF6Q16630 551 aaKnown RBP eCLIP21.6■■□□□ 1.052e-7■■■□□ 16.2
UPF3A-201ENST00000351487 ZXDCQ2QGD7 858 aaPredicted RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 ENPP6Q6UWR7 440 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 SLC39A5Q6ZMH5 540 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 UBE2R2Q712K3 238 aaPredicted RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 FAM9CQ8IZT9 166 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 PNPT1Q8TCS8 783 aaKnown RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 TOX2Q96NM4 488 aa21.6■■□□□ 1.05
UPF3A-201ENST00000351487 PAIP1Q9H074 479 aaKnown RBP21.6■■□□□ 1.05
UPF3A-201ENST00000351487 KAT8Q9H7Z6 458 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms