RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 PLXDC1Q8IUK5 500 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 SPNS2Q8IVW8 549 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 SLITRK4Q8IW52 837 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 OR4E2Q8NGC2 313 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 OR4D9Q8NGE8 314 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 UHMK1Q8TAS1 419 aaKnown RBP13.55□□□□□ -0.24
SEC13-202ENST00000350697 SLC44A1Q8WWI5 657 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 ASB11Q8WXH4 323 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 RAD51AP1Q96B01 352 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 MRRFQ96E11 262 aaKnown RBP13.55□□□□□ -0.24
SEC13-202ENST00000350697 RAB33BQ9H082 229 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 SRMSQ9H3Y6 488 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 SYTL2Q9HCH5 934 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 EPHA6Q9UF33 1036 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 IKBKGQ9Y6K9 419 aa13.55□□□□□ -0.24
SEC13-202ENST00000350697 EXOC1LA0A1B0GW35 172 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 FAM149AA5PLN7 773 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 OR5K3A6NET4 321 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 TSPAN12O95859 305 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 TOP3BO95985 862 aaKnown RBP13.54□□□□□ -0.24
SEC13-202ENST00000350697 CATP04040 527 aaKnown RBP13.54□□□□□ -0.24
SEC13-202ENST00000350697 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
SEC13-202ENST00000350697 STMN1P16949 149 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 ZNF37AP17032 561 aaPredicted RBP13.54□□□□□ -0.24
SEC13-202ENST00000350697 CCKBRP32239 447 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 SHMT2P34897 504 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 BDKRB1P46663 353 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 PGGT1BP53609 377 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 INHBCP55103 352 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 ZFP36L1Q07352 338 aaKnown RBP13.54□□□□□ -0.24
SEC13-202ENST00000350697 SLC29A2Q14542 456 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 ZNF574Q6ZN55 896 aaPredicted RBP13.54□□□□□ -0.24
SEC13-202ENST00000350697 AMIGO1Q86WK6 493 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 CEP97Q8IW35 865 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 MYO1HQ8N1T3 1032 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 NKAPQ8N5F7 415 aaKnown RBP13.54□□□□□ -0.24
SEC13-202ENST00000350697 LINGO1Q96FE5 620 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 PDLIM5Q96HC4 596 aaKnown RBP13.54□□□□□ -0.24
SEC13-202ENST00000350697 PAFAH2Q99487 392 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 SCNM1Q9BWG6 230 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 EPB41L4BQ9H329 900 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 CAB39LQ9H9S4 337 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 HRASLS2Q9NWW9 162 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 PDP2Q9P2J9 529 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 ICKQ9UPZ9 632 aa13.54□□□□□ -0.24
SEC13-202ENST00000350697 MN1Q10571 1320 aaPredicted RBP13.53□□□□□ -0.24
SEC13-202ENST00000350697 CEP295Q9C0D2 2601 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 IGHV5-10-1A0A0J9YXX1 117 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 MED19A0JLT2 244 aaPredicted RBP13.53□□□□□ -0.24
SEC13-202ENST00000350697 OR6C74A6NCV1 312 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 ARHGEF33A8MVX0 844 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 POC1B-GALNT4F8VUJ3 575 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 GFYI3L273 518 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 MATN2O00339 956 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 CAPN5O15484 640 aaPredicted RBP13.53□□□□□ -0.24
SEC13-202ENST00000350697 ZBTB14O43829 449 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 C9P02748 559 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 C8GP07360 202 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 TPBGLP0DKB5 382 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 MSH2P43246 934 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 SERPINB9P50453 376 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 RAB28P51157 221 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 RAB10P61026 200 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 PRKAA1Q13131 559 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 TRA2AQ13595 282 aaKnown RBP eCLIP13.53□□□□□ -0.24
SEC13-202ENST00000350697 GRB7Q14451 532 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 ZNF460Q14592 562 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 ZKSCAN8Q15776 578 aaPredicted RBP13.53□□□□□ -0.24
SEC13-202ENST00000350697 ARMC6Q6NXE6 501 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 TMEM207Q6UWW9 146 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 TAOK1Q7L7X3 1001 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 B3GNT8Q7Z7M8 397 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 RASGRP3Q8IV61 690 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 FBXO15Q8NCQ5 510 aaPredicted RBP13.53□□□□□ -0.24
SEC13-202ENST00000350697 AENQ8WTP8 325 aaKnown RBP13.53□□□□□ -0.24
SEC13-202ENST00000350697 UBLCP1Q8WVY7 318 aaPredicted RBP13.53□□□□□ -0.24
SEC13-202ENST00000350697 ZDHHC12Q96GR4 267 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 STRADBQ9C0K7 418 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 ACBD3Q9H3P7 528 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 SEMA6CQ9H3T2 930 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 XKR8Q9H6D3 395 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 OR6C2Q9NZP2 312 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 TMEM9Q9P0T7 183 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 ZNF180Q9UJW8 692 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 KLK13Q9UKR3 277 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 NEUROG3Q9Y4Z2 214 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 ENTPD2Q9Y5L3 495 aa13.53□□□□□ -0.24
SEC13-202ENST00000350697 KRT38O76015 456 aa13.52□□□□□ -0.25
SEC13-202ENST00000350697 THRAP10827 490 aa13.52□□□□□ -0.25
SEC13-202ENST00000350697 POLR2CP19387 275 aaPredicted RBP13.52□□□□□ -0.25
SEC13-202ENST00000350697 MPSTP25325 297 aa13.52□□□□□ -0.25
SEC13-202ENST00000350697 MAP4P27816 1152 aaKnown RBP13.52□□□□□ -0.25
SEC13-202ENST00000350697 PKLRP30613 574 aa13.52□□□□□ -0.25
SEC13-202ENST00000350697 GFERP55789 205 aa13.52□□□□□ -0.25
SEC13-202ENST00000350697 SHC2P98077 582 aa13.52□□□□□ -0.25
SEC13-202ENST00000350697 SP140Q13342 867 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms