RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 EGFL7Q9UHF1 273 aa19.89■□□□□ 0.77
CHRNA3-202ENST00000348639 OTOL1A6NHN0 477 aaPredicted RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 VARSP26640 1264 aaKnown RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 PBX2P40425 430 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 SLC6A11P48066 632 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 GSK3BP49841 420 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 IMPG1Q17R60 797 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 NANOGP8Q6NSW7 305 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 SLC2A7Q6PXP3 512 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 GALNT13Q8IUC8 556 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 NRSN1Q8IZ57 195 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 CANT1Q8WVQ1 401 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 FGF13Q92913 245 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 GLYATL1Q969I3 302 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 NXPE3Q969Y0 559 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 MIEF2Q96C03 454 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 TRIM8Q9BZR9 551 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 NANOGQ9H9S0 305 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 LRTM1Q9HBL6 345 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 RAB26Q9ULW5 256 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 YBX2Q9Y2T7 364 aaKnown RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 OR2AG2A6NM03 316 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 ZNF839A8K0R7 811 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 PSMD11O00231 422 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 KPNA3O00505 521 aaPredicted RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 DENRO43583 198 aaKnown RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 RSL1D1O76021 490 aaKnown RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 PRNPP04156 253 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 LIPEQ05469 1076 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 GRIN2CQ14957 1233 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 PTCHD3Q3KNS1 767 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 SGO1Q5FBB7 561 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 ZNF648Q5T619 568 aaPredicted RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 PTRH1Q86Y79 214 aaKnown RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 HID1Q8IV36 788 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 BEND7Q8N7W2 519 aaPredicted RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 ASB16Q96NS5 453 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 SAMD11Q96NU1 681 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 CCM2LQ9NUG4 571 aaPredicted RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 INTS7Q9NVH2 962 aaKnown RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 ZNHIT2Q9UHR6 403 aa19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 CNOT6Q9ULM6 557 aaKnown RBP19.88■□□□□ 0.77
CHRNA3-202ENST00000348639 PRRT4C9JH25 899 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 ARPC2O15144 300 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 PAPLNO95428 1278 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 NFATC1O95644 943 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 PIM1P11309 404 aaPredicted RBP19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 INPP5AQ14642 412 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 KIAA0040Q15053 153 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 ACOX1Q15067 660 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 SHHQ15465 462 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 CPSF6Q16630 551 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 CAPRIN2Q6IMN6 1127 aaKnown RBP19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 DLEU7Q6UYE1 221 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 GET4Q7L5D6 327 aaPredicted RBP19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 SPPL2CQ8IUH8 684 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 APLFQ8IW19 511 aaPredicted RBP19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 RAVER1Q8IY67 606 aaKnown RBP19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 VN1R2Q8NFZ6 395 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 AP2M1Q96CW1 435 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 ZBTB18Q99592 522 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 KCTD14Q9BQ13 255 aaPredicted RBP19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 Q9H521 79 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 SNX13Q9Y5W8 968 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 REV3LO60673 3130 aa19.87■□□□□ 0.77
CHRNA3-202ENST00000348639 WNT9AO14904 365 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 SEC22BO75396 215 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 HSPA13P48723 471 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 CACHD1Q5VU97 1274 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 OR52E8Q6IFG1 317 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 NEK5Q6P3R8 708 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 FBXL19Q6PCT2 694 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 RASGEF1AQ8N9B8 481 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 L3MBTL4Q8NA19 623 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 SMARCD2Q92925 531 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 EME1Q96AY2 570 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 SFXN1Q9H9B4 322 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 C1orf109Q9NX04 203 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 SNX6Q9UNH7 406 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 ITM2BQ9Y287 266 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 KCNE1BA0A087WTH5 132 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 H0Y858 1186 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 TXNDC9O14530 226 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 GSTM1P09488 218 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 HLA-EP13747 358 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 ZNF26P17031 533 aaPredicted RBP19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 FSHRP23945 695 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 GSTM4Q03013 218 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 PTGR1Q14914 329 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 DUSP6Q16828 381 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 GAB4Q2WGN9 574 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 FNDC3BQ53EP0 1204 aaKnown RBP19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 GLB1L3Q8NCI6 653 aaPredicted RBP19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 FBXL8Q96CD0 374 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 TMEM74Q96NL1 305 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 ACPTQ9BZG2 426 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 SEMA6AQ9H2E6 1030 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 IGFLR1Q9H665 355 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 DNAJC11Q9NVH1 559 aa19.86■□□□□ 0.77
CHRNA3-202ENST00000348639 DEC1Q9P2X7 70 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms