RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ZNF77Q15935 545 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 C18orf21Q32NC0 220 aaPredicted RBP20.87■□□□□ 0.93
PTPN18-202ENST00000347849 PAGE3Q5JUK9 113 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 RAB44Q7Z6P3 723 aaPredicted RBP20.87■□□□□ 0.93
PTPN18-202ENST00000347849 TBC1D21Q8IYX1 336 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 ADGRG2Q8IZP9 1017 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 NKAPQ8N5F7 415 aaKnown RBP20.87■□□□□ 0.93
PTPN18-202ENST00000347849 FANCEQ9HB96 536 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 C8orf4Q9NR00 106 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 SPHK2Q9NRA0 654 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 CORINQ9Y5Q5 1042 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 ALPK3Q96L96 1907 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 MTCL1Q9Y4B5 1905 aaKnown RBP20.87■□□□□ 0.93
PTPN18-202ENST00000347849 ADARB1P78563 741 aaKnown RBP20.87■□□□□ 0.93
PTPN18-202ENST00000347849 ILF2Q12905 390 aaKnown RBP20.87■□□□□ 0.93
PTPN18-202ENST00000347849 KANK2Q63ZY3 851 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 LRRC66Q68CR7 880 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 USP51Q70EK9 711 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 SLC15A4Q8N697 577 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 CYB5D2Q8WUJ1 264 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 HERVK_113Q902F9 699 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 RNF145Q96MT1 663 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 SUV39H2Q9H5I1 410 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 ARMC7Q9H6L4 198 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 ZNF225Q9UK10 706 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 PCDHGA4Q9Y5G9 962 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 TRANK1O15050 2925 aa20.87■□□□□ 0.93
PTPN18-202ENST00000347849 A0A1W2PP18 115 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 TMEM221A6NGB7 291 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 TRIM64BA6NI03 449 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 COQ9O75208 318 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 CLCQ05315 142 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 PSRC1Q6PGN9 363 aaPredicted RBP20.86■□□□□ 0.93
PTPN18-202ENST00000347849 DCBLD1Q8N8Z6 715 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 BIRC7Q96CA5 298 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 ECHDC3Q96DC8 303 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 ASB2Q96Q27 587 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 CHID1Q9BWS9 393 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 TRIM54Q9BYV2 358 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 TIMM22Q9Y584 194 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 HELZP42694 1942 aaKnown RBP20.86■□□□□ 0.93
PTPN18-202ENST00000347849 GLYATL1P3A0A0U1RQE8 302 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 IDO1P14902 403 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 PFKLP17858 780 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 MAPK8P45983 427 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 KCNK10P57789 538 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 RAB15P59190 212 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 PTSQ03393 145 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 GRSF1Q12849 480 aaKnown RBP eCLIP20.86■□□□□ 0.93
PTPN18-202ENST00000347849 PYCR3Q53H96 274 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 SNX20Q7Z614 316 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 C12orf76Q8N812 135 aaPredicted RBP20.86■□□□□ 0.93
PTPN18-202ENST00000347849 BPIFB6Q8NFQ5 453 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 OR13F1Q8NGS4 319 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 ITFG1Q8TB96 612 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 GPR45Q9Y5Y3 372 aa20.86■□□□□ 0.93
PTPN18-202ENST00000347849 PFDN6O15212 129 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 ALBP02768 609 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 NR1D2Q14995 579 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 TMEM214Q6NUQ4 689 aaKnown RBP20.85■□□□□ 0.93
PTPN18-202ENST00000347849 ZNF707Q96C28 371 aaPredicted RBP20.85■□□□□ 0.93
PTPN18-202ENST00000347849 TUBA1CQ9BQE3 449 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 YTHDF1Q9BYJ9 559 aaKnown RBP20.85■□□□□ 0.93
PTPN18-202ENST00000347849 INIPQ9NRY2 104 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 MBD1Q9UIS9 605 aaPredicted RBP20.85■□□□□ 0.93
PTPN18-202ENST00000347849 DHRS7Q9Y394 339 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 ASPDHA6ND91 283 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 CRCPO75575 148 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 FOXM1Q08050 763 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 PDCD4Q53EL6 469 aaKnown RBP20.85■□□□□ 0.93
PTPN18-202ENST00000347849 ARHGAP15Q53QZ3 475 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 CARD16Q5EG05 197 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 PTRHD1Q6GMV3 140 aaKnown RBP20.85■□□□□ 0.93
PTPN18-202ENST00000347849 PTRH1Q86Y79 214 aaKnown RBP20.85■□□□□ 0.93
PTPN18-202ENST00000347849 SCRN2Q96FV2 425 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 TMEM9Q9P0T7 183 aa20.85■□□□□ 0.93
PTPN18-202ENST00000347849 KLK8O60259 260 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 KCNH1O95259 989 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 TRIM16O95361 564 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 BCL10O95999 233 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 RPS17P08708 135 aaKnown RBP20.84■□□□□ 0.93
PTPN18-202ENST00000347849 CD9P21926 228 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 ACRV1P26436 265 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 BCAP31P51572 246 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 ITGADQ13349 1161 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 GALNT18Q6P9A2 607 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 SCIMPQ6UWF3 145 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 ADGRD2Q7Z7M1 963 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 KIAA2013Q8IYS2 634 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 PAPD5Q8NDF8 572 aaKnown RBP20.84■□□□□ 0.93
PTPN18-202ENST00000347849 OR2A12Q8NGT7 310 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 CLPBQ9H078 707 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 TRBV5-4A0A0C4DH59 114 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 H0Y858 1186 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 SERPINB7O75635 380 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 UMPSP11172 480 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 UFM1P61960 85 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 PHEXP78562 749 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 MESP2Q0VG99 397 aa20.84■□□□□ 0.93
PTPN18-202ENST00000347849 ZNF773Q6PK81 442 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms