RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 EIF3LQ9Y262 564 aaKnown RBP15.57■□□□□ 0.08
HMGA1-202ENST00000347617 PCDHGA10Q9Y5H3 936 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 V9GYQ6 96 aa15.57■□□□□ 0.08
HMGA1-202ENST00000347617 COL4A6Q14031 1691 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 EVPLLA8MZ36 301 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 SUPT3HB4E1H0 165 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 RGS10O43665 173 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 HS6ST1O60243 411 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 PAGE1O75459 146 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 SNX4O95219 450 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 AGXTP21549 392 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 PIGAP37287 484 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 GPR15P49685 360 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 PGFP49763 221 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 DUSP4Q13115 394 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 TRIP4Q15650 581 aaPredicted RBP15.56■□□□□ 0.08
HMGA1-202ENST00000347617 C6orf136Q5SQH8 315 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 ARHGAP36Q6ZRI8 547 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 PAGE2Q7Z2X7 111 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF461Q8TAF7 563 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 RASSF5Q8WWW0 418 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 LGALS12Q96DT0 336 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 ZHX1-C8orf76Q96EF9 292 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 B3GALT6Q96L58 329 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 SNX18Q96RF0 628 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 AARSD1Q9BTE6 412 aaKnown RBP15.56■□□□□ 0.08
HMGA1-202ENST00000347617 SIAEQ9HAT2 523 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 VPS51Q9UID3 782 aa15.56■□□□□ 0.08
HMGA1-202ENST00000347617 LCHNA4D1U4 455 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 PTGES3LE9PB15 166 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 CD3EAPO15446 510 aaKnown RBP15.55■□□□□ 0.08
HMGA1-202ENST00000347617 RECQL5O94762 991 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-202ENST00000347617 DCTP40126 519 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 CASP3P42574 277 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 KRT6CP48668 564 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 ARPP19P56211 112 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 IFITM2Q01629 132 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 PRKCDQ05655 676 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 RAD51Q06609 339 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 TAF10Q12962 218 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF404Q494X3 552 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 ARTNQ5T4W7 220 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 CAPN13Q6MZZ7 669 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-202ENST00000347617 KIAA1841Q6NSI8 718 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 SPESP1Q6UW49 350 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 PRSS55Q6UWB4 352 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-202ENST00000347617 DDX53Q86TM3 631 aaKnown RBP15.55■□□□□ 0.08
HMGA1-202ENST00000347617 RYBPQ8N488 228 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-202ENST00000347617 PSMA8Q8TAA3 256 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 PROX1Q92786 737 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 PABPC5Q96DU9 382 aaKnown RBP15.55■□□□□ 0.08
HMGA1-202ENST00000347617 FCRL2Q96LA5 508 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-202ENST00000347617 TEX37Q96LM6 180 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF583Q96ND8 569 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 ZBTB18Q99592 522 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 C17orf80Q9BSJ5 609 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 VN1R3Q9BXE9 311 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 TRIM8Q9BZR9 551 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 NEK6Q9HC98 313 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 SPG21Q9NZD8 308 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 KLQ9UEF7 1012 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 ADGRE2Q9UHX3 823 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 SNX10Q9Y5X0 201 aa15.55■□□□□ 0.08
HMGA1-202ENST00000347617 ANKRD34BA5PLL1 514 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 AGAP5A6NIR3 686 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 SLC38A8A6NNN8 435 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 IGLV3-27P01718 113 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 KRT8P05787 483 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 NR4A1P22736 598 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TCEA1P23193 301 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 PBX3P40426 434 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 NRIP1P48552 1158 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TRPC1P48995 793 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TBX4P57082 545 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 WDR5P61964 334 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 IL5RAQ01344 420 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TRAF3Q13114 568 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 EML3Q32P44 896 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 SDHAF4Q5VUM1 108 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 GPRIN3Q6ZVF9 776 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 RALGPS2Q86X27 583 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 ELMOD1Q8N336 334 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 NKAPQ8N5F7 415 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TTC9BQ8N6N2 239 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 POC5Q8NA72 575 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 FNDC5Q8NAU1 212 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF548Q8NEK5 533 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 CAPSLQ8WWF8 208 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TRIM43Q96BQ3 446 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TMEM169Q96HH4 297 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 NSUN5Q96P11 429 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 ZNF382Q96SR6 550 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 SEPT5Q99719 369 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 TMEM106CQ9BVX2 250 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 CRISPLD1Q9H336 500 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 DKK3Q9UBP4 350 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 LIMD1Q9UGP4 676 aa15.54■□□□□ 0.08
HMGA1-202ENST00000347617 RBMX2Q9Y388 322 aaKnown RBP15.54■□□□□ 0.08
HMGA1-202ENST00000347617 GREB1Q4ZG55 1949 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms