RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PDE10AQ9Y233 779 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TRBV5-4A0A0C4DH59 114 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 PRMT5O14744 637 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ETHE1O95571 254 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 INHBBP09529 407 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 NFKBIAP25963 317 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 HLA-FP30511 346 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 MTHFRP42898 656 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 MNX1P50219 401 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ARSFP54793 590 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CACNG1Q06432 222 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CD300CQ08708 224 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 BNIP3Q12983 259 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 DOC2BQ14184 412 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 POM121L1PQ3SYA9 428 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 PIWIL3Q7Z3Z3 882 aaKnown RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CMTM8Q8IZV2 173 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 AFAP1L2Q8N4X5 818 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 SNX19Q92543 992 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 SCAMP4Q969E2 229 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 MYO19Q96H55 970 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 DPH2Q9BQC3 489 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 BEGAINQ9BUH8 593 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 RSPO3Q9BXY4 272 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 LHPPQ9H008 270 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ELAC1Q9H777 363 aaKnown RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 CXorf21Q9HAI6 301 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 MAGEE1Q9HCI5 957 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TMEM184CQ9NVA4 438 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 SMPD3Q9NY59 655 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ZIM2Q9NZV7 527 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 IFT80Q9P2H3 777 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 LEF1Q9UJU2 399 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-201ENST00000347613 ABCG2Q9UNQ0 655 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 PCDHB3Q9Y5E6 796 aa5.91□□□□□ -1.46
CLCN3-201ENST00000347613 TCF20Q9UGU0 1960 aaKnown RBP5.9□□□□□ -1.46
CLCN3-201ENST00000347613 KCNE1BA0A087WTH5 132 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 SYCE1LA8MT33 242 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 RFXAPO00287 272 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 ESR1P03372 595 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 NUDT7P0C024 238 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 BCKDHAP12694 445 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 IL10P22301 178 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 JAK1P23458 1154 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 CAPGP40121 348 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 HSPA13P48723 471 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 SREBF2Q12772 1141 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 BNIP2Q12982 314 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 PRKG2Q13237 762 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 GBX1Q14549 363 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 PON2Q15165 354 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 SMN1Q16637 294 aaKnown RBP5.9□□□□□ -1.46
CLCN3-201ENST00000347613 PRSS53Q2L4Q9 553 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 MAP7D1Q3KQU3 841 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 COQ5Q5HYK3 327 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 IRAK1BP1Q5VVH5 260 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 LRRC66Q68CR7 880 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 SULT1C3Q6IMI6 304 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 CHST9Q7L1S5 443 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 CYP4Z1Q86W10 505 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 LRRC43Q8N309 656 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 PDLIM5Q96HC4 596 aaKnown RBP5.9□□□□□ -1.46
CLCN3-201ENST00000347613 ASB2Q96Q27 587 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 TMEM121BQ9BXQ6 578 aaPredicted RBP5.9□□□□□ -1.46
CLCN3-201ENST00000347613 EBPLQ9BY08 206 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 POLR1BQ9H9Y6 1135 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 LATS2Q9NRM7 1088 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 CREBZFQ9NS37 354 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 GID8Q9NWU2 228 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 SIRT5Q9NXA8 310 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 ATXN10Q9UBB4 475 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 COMMD10Q9Y6G5 202 aa5.9□□□□□ -1.46
CLCN3-201ENST00000347613 MTCL1Q9Y4B5 1905 aaKnown RBP5.9□□□□□ -1.46
CLCN3-201ENST00000347613 KLHL33A6NCF5 533 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 ARNTLO00327 626 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 PGRP06401 933 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 HSPA8P11142 646 aaKnown RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 ACPPP15309 386 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 PSMD7P51665 324 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 EEFSECP57772 596 aaKnown RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 PWP1Q13610 501 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 LDLRAP1Q5SW96 308 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 PTRHD1Q6GMV3 140 aaKnown RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 FAM180BQ6P0A1 224 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 GCNT7Q6ZNI0 430 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 Q6ZPB1 254 aaPredicted RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 R3HCC1LQ7Z5L2 792 aaKnown RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 TSEN54Q7Z6J9 526 aaKnown RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 STK32CQ86UX6 486 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 CCDC71Q8IV32 467 aaPredicted RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF366Q8N895 744 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 CNIH3Q8TBE1 160 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 TBC1D15Q8TC07 691 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 PLD4Q96BZ4 506 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 TSSK3Q96PN8 268 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 BBS2Q9BXC9 721 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 NUSAP1Q9BXS6 441 aaKnown RBP5.9□□□□□ -1.47
CLCN3-201ENST00000347613 ADGRE3Q9BY15 652 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 ATG10Q9H0Y0 220 aa5.9□□□□□ -1.47
CLCN3-201ENST00000347613 CLMPQ9H6B4 373 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms