RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 OSTF1Q92882 214 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 RHBGQ9H310 441 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 CMAHPQ9Y471 501 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF20P17024 532 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 CYP2B6P20813 491 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 PSEN2P49810 448 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 COLEC12Q5KU26 742 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 C10orf62Q5T681 223 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-201ENST00000345617 HID1Q8IV36 788 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 C1orf216Q8TAB5 229 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ASB12Q8WXK4 309 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ABHD16BQ9H3Z7 469 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 CYTH4Q9UIA0 394 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 GADD45GO95257 159 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ZC3H12AQ5D1E8 599 aaKnown RBP19.04■□□□□ 0.64
HDAC4-201ENST00000345617 IL23RQ5VWK5 629 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ALG3Q92685 438 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 GTF2IRD1Q9UHL9 959 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 MSX2P35548 267 aaPredicted RBP19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ARL3P36405 182 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 CCNFP41002 786 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 NOMO3P69849 1222 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 SYT16Q17RD7 645 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 OR10A6Q8NH74 314 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 GLYATL1P3A0A0U1RQE8 302 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 GMFGO60234 142 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 NADK2Q4G0N4 442 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 CMC1Q7Z7K0 106 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 P2RY11Q96G91 374 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 APOLD1Q96LR9 279 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 HSPB11Q9Y547 144 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 B3GNT4Q9C0J1 378 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ZIM2Q9NZV7 527 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 COL1A2P08123 1366 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 EIF1AYO14602 144 aaKnown RBP19.04■□□□□ 0.64
HDAC4-201ENST00000345617 MAGEA8P43361 318 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 EIF1AXP47813 144 aaKnown RBP19.04■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF132P52740 706 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 PCDH1Q08174 1060 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 DAG1Q14118 895 aa19.04■□□□□ 0.64
HDAC4-201ENST00000345617 FXYD6-FXYD2A0A087WZ82 144 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 DUXAA6NLW8 204 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF823P16415 610 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ABCG1P45844 678 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 CRISP3P54108 245 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 EEFSECP57772 596 aaKnown RBP19.03■□□□□ 0.64
HDAC4-201ENST00000345617 NOMO1Q15155 1222 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 GRK1Q15835 563 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 CLIP3Q96DZ5 547 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 CEP295NLQ96MC4 621 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 FXYD6Q9H0Q3 95 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 PACSIN3Q9UKS6 424 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 PLD2O14939 933 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 SPAM1P38567 509 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 WNT3AP56704 352 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 VLDLRP98155 873 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 USP20Q9Y2K6 914 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 DISC1C4P0D8 188 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ITPKBP27987 946 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 NRIP1P48552 1158 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 PTGR1Q14914 329 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ASB18Q6ZVZ8 466 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 PAQR7Q86WK9 346 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ITPKCQ96DU7 683 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 SPON1Q9HCB6 807 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ADGRB1O14514 1584 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 A0A075B6Q4 140 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 DCDC5Q6ZRR9 648 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 SLC22A16Q86VW1 577 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 GTPBP3Q969Y2 492 aaKnown RBP19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ADAMTS10Q9H324 1103 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 EQTNQ9NQ60 294 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 UCKL1Q9NWZ5 548 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 RUVBL1Q9Y265 456 aaKnown RBP19.03■□□□□ 0.64
HDAC4-201ENST00000345617 BANF1O75531 89 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 SH3PXD2AQ5TCZ1 1133 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 OR2T5Q6IEZ7 315 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 OR2T29Q8NH02 315 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ZDHHC4Q9NPG8 344 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 HCN3Q9P1Z3 774 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 PDYNP01213 254 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 CDKN2BP42772 138 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 MFSD2AQ8NA29 543 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 LNX1Q8TBB1 728 aaPredicted RBP19.03■□□□□ 0.64
HDAC4-201ENST00000345617 STON2Q8WXE9 905 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 PCDHGA11Q9Y5H2 935 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ASCC3Q8N3C0 2202 aaKnown RBP19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ABCB7O75027 752 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 PGAM2P15259 253 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 TATDN1Q6P1N9 297 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF627Q7L945 461 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 ATAD1Q8NBU5 361 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 RIOK2Q9BVS4 552 aaKnown RBP19.03■□□□□ 0.64
HDAC4-201ENST00000345617 RTFDC1Q9BY42 306 aaPredicted RBP19.03■□□□□ 0.64
HDAC4-201ENST00000345617 EDARQ9UNE0 448 aa19.03■□□□□ 0.64
HDAC4-201ENST00000345617 BORCS7-ASMTA0A0B4J1R7 106 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 INTS6LQ5JSJ4 861 aaKnown RBP19.02■□□□□ 0.64
HDAC4-201ENST00000345617 DPF3Q92784 378 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 EXOC2Q96KP1 924 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 TM9SF3Q9HD45 589 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms