RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 UBFD1O14562 309 aaKnown RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 AREL1O15033 823 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 RPS17P08708 135 aaKnown RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 NCF1P14598 390 aaPredicted RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 INHBCP55103 352 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 CDH13P55290 713 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 CLCQ05315 142 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 TMEM52BQ4KMG9 183 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 EGFLAMQ63HQ2 1017 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 SBSNQ6UWP8 590 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ZNF554Q86TJ5 538 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 MMAAQ8IVH4 418 aaKnown RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 EFCAB3Q8N7B9 438 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ANKFN1Q8N957 763 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 DDHD1Q8NEL9 900 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ADAMTS16Q8TE57 1224 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ZUFSPQ96AP4 578 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 DTD2Q96FN9 168 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 WRAP53Q9BUR4 548 aaKnown RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 ANKRD60Q9BZ19 345 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 SPAG4Q9NPE6 437 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 CACNA2D2Q9NY47 1150 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ADA2Q9NZK5 511 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 HCN2Q9UL51 889 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ZNF232Q9UNY5 417 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 COPG1Q9Y678 874 aaKnown RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 MTCH2Q9Y6C9 303 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 STON1Q9Y6Q2 735 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 TRPM6Q9BX84 2022 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 A0A0J9YVX5 310 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 TCRBV3S1A0A5B6 114 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 BBIP1A8MTZ0 92 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 TMEM233B4DJY2 109 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 SPINT1O43278 529 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ATP6V1G1O75348 118 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 CDK14O94921 469 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 MLYCDO95822 493 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 BMP2P12643 396 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 AOAHP28039 575 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 GALK1P51570 392 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 HK3P52790 923 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 METAP1P53582 386 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 SH3BP2P78314 561 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 LCP2Q13094 533 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ENPP2Q13822 863 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 COL19A1Q14993 1142 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 PLEKHS1Q5SXH7 462 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 PPP4R4Q6NUP7 873 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 CYHR1Q6ZMK1 362 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ZNF765Q7L2R6 523 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 LPCAT2Q7L5N7 544 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 GLYATL1Q969I3 302 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ROPN1LQ96C74 230 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 ACOX2Q99424 681 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 YTHDF1Q9BYJ9 559 aaKnown RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 MEAF6Q9HAF1 191 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 MID1IP1Q9NPA3 183 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 DDX18Q9NVP1 670 aaKnown RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 ARMC1Q9NVT9 282 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 FAF1Q9UNN5 650 aaPredicted RBP12.55□□□□□ -0.4
CLK3-201ENST00000345005 ITM2BQ9Y287 266 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 FIS1Q9Y3D6 152 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 OARD1Q9Y530 152 aa12.55□□□□□ -0.4
CLK3-201ENST00000345005 LRRC14BA6NHZ5 514 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 FADS2P1A8MWK0 482 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 ANHXE9PGG2 379 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 H3BSA7 217 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 SDHDO14521 159 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 FFAR2O15552 330 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 CBFA2T3O75081 653 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 RNASEH2AO75792 299 aaKnown RBP12.54□□□□□ -0.4
CLK3-201ENST00000345005 FTH1P02794 183 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 TSPAN8P19075 237 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 POU3F3P20264 500 aaPredicted RBP12.54□□□□□ -0.4
CLK3-201ENST00000345005 SLC5A2P31639 672 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 CCR7P32248 378 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 AGTR2P50052 363 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 PKNOX1P55347 436 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 CDKL1Q00532 357 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 HTR4Q13639 388 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 DET1Q7L5Y6 550 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 CHPFQ8IZ52 775 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 PCYOX1LQ8NBM8 494 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 PDPRQ8NCN5 879 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 SMRP1Q8NCR6 262 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 ZNF420Q8TAQ5 688 aaPredicted RBP12.54□□□□□ -0.4
CLK3-201ENST00000345005 PPP1R36Q96LQ0 422 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 P2RY13Q9BPV8 354 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 TMEM79Q9BSE2 394 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 OSBPL6Q9BZF3 934 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 RDH14Q9HBH5 336 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 PCTPQ9UKL6 214 aa12.54□□□□□ -0.4
CLK3-201ENST00000345005 TRIM64CA6NLI5 447 aa12.53□□□□□ -0.4
CLK3-201ENST00000345005 AZIN1O14977 448 aa12.53□□□□□ -0.4
CLK3-201ENST00000345005 LZTS3O60299 673 aaPredicted RBP12.53□□□□□ -0.4
CLK3-201ENST00000345005 GPC4O75487 556 aa12.53□□□□□ -0.4
CLK3-201ENST00000345005 JUNP05412 331 aaKnown RBP12.53□□□□□ -0.4
CLK3-201ENST00000345005 MPC1LP0DKB6 136 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms