RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 GRHL3Q8TE85 626 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 TRIM43Q96BQ3 446 aaPredicted RBP3.71□□□□□ -1.82
SYNE2-202ENST00000344113 GCC2Q8IWJ2 1684 aa3.71□□□□□ -1.82
SYNE2-202ENST00000344113 UNC13CQ8NB66 2214 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 EFCAB9A8MZ26 197 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PROS1P07225 676 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 LINC00614P0C842 121 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 KITP10721 976 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 GPD1P21695 349 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ZP3P21754 424 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 LIMS1P48059 325 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 AUHQ13825 339 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FUT10Q6P4F1 479 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SMARCD3Q6STE5 483 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FAM131AQ6UXB0 335 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ROGDIQ9GZN7 287 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 NTN4Q9HB63 628 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 HIF3AQ9Y2N7 669 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 GRIN2BQ13224 1484 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 C2orf92A0A1B0GVN3 265 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 UPK1BO75841 260 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 STK17BO94768 372 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SCGB1D1O95968 90 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CNPP09543 421 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ITPKAP23677 461 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 VAMP2P63027 116 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MICAQ29983 383 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TTI2Q6NXR4 508 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 KLBQ86Z14 1044 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PHTF2Q8N3S3 785 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MYCT1Q8N699 235 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TSGA13Q96PP4 275 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 NOX3Q9HBY0 568 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MAGEL2Q9UJ55 1249 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CYP11B1P15538 503 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 GBE1Q04446 702 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MERTKQ12866 999 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TNK1Q13470 666 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FAM187BQ17R55 369 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM41BQ5BJD5 291 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TMUB2Q71RG4 321 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CEP68Q76N32 757 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ZCCHC9Q8N567 271 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 OR5T3Q8NGG3 340 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 OR52N1Q8NH53 320 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 COPS9Q8WXC6 57 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 HTRA1Q92743 480 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TFAP2CQ92754 450 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BTN2A3PQ96KV6 586 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CEPT1Q9Y6K0 416 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 RFPL3O75679 317 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 MLYCDO95822 493 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 HSD3B1P14060 373 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 S1PR1P21453 382 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CASP1P29466 404 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SLC26A2P50443 739 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BTG1P62324 171 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TRAM1Q15629 374 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 WSCD2Q2TBF2 565 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FAM162BQ5T6X4 162 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 NRROSQ86YC3 692 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CPNE9Q8IYJ1 553 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 HAVCR2Q8TDQ0 301 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 TBC1D13Q9NVG8 400 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PAK4O96013 591 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CARM1Q86X55 608 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ECHDC2Q86YB7 292 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 DEFB107AQ8IZN7 70 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 GHDCQ8N2G8 530 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 C1orf74Q96LT6 269 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SPATA5L1Q9BVQ7 753 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SP110Q9HB58 689 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ABCA9Q8IUA7 1624 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 USP17L13C9JLJ4 530 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 USP17L17D6RBQ6 530 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SPP1P10451 314 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 IL1RNP18510 177 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CBX2Q14781 532 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ARHGAP19Q14CB8 494 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 GPR107Q5VW38 600 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PIWIL4Q7Z3Z4 852 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 RAVER1Q8IY67 606 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 KLHDC1Q8N7A1 406 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ADAP2Q9NPF8 381 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 VSX1Q9NZR4 365 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 FBXL4Q9UKA2 621 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ADAM23O75077 832 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PTP4A3O75365 173 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ATP6V1B2P21281 511 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PRSS42Q7Z5A4 293 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 APCDD1Q8J025 514 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 EID2Q8N6I1 236 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 PPM1NQ8N819 430 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF341Q9BYN7 854 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 SCP2D1Q9UJQ7 156 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 DOLKQ9UPQ8 538 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 DOCK9Q9BZ29 2069 aa3.7□□□□□ -1.82
SYNE2-202ENST00000344113 BCAS2O75934 225 aaPredicted RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 CELF2O95319 508 aaKnown RBP3.7□□□□□ -1.82
SYNE2-202ENST00000344113 ACTR2P61160 394 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms