RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 UXS1Q8NBZ7 420 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 COL21A1Q96P44 957 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 BBS4Q96RK4 519 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SGK2Q9HBY8 427 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 AGPAT4Q9NRZ5 378 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 RPS6KB2Q9UBS0 482 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TLR6Q9Y2C9 796 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ANKRD12Q6UB98 2062 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TSPAN3O60637 253 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CNTN5O94779 1100 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PRPS1L1P21108 318 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ERP29P30040 261 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ATN1P54259 1190 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ATP12AP54707 1039 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 KCNAB2Q13303 367 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TBRG1Q3YBR2 411 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 RABL3Q5HYI8 236 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 KRT78Q8N1N4 520 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ZBTB2Q8N680 514 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ELMO1Q92556 727 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 USP7Q93009 1102 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TCF25Q9BQ70 676 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ADARB2Q9NS39 739 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 MED11Q9P086 117 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ARL5AQ9Y689 179 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SMIM28A0A1B0GU29 152 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 DFNA5O60443 496 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 MYCP01106 439 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TRBC1P01850 177 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 C8GP07360 202 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SRPRAP08240 638 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TAS2R41P59536 307 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SHQ1Q6PI26 577 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TMIEQ8NEW7 156 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 KIAA1191Q96A73 305 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PAK6Q9NQU5 681 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 RAD18Q9NS91 495 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 THUMPD1Q9NXG2 353 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 KCTD5Q9NXV2 234 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ENTPD4Q9Y227 616 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CCL15-CCL14A0A0B4J2E2 113 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ADCYAP1R1P41586 468 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 UFM1P61960 85 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CCL15Q16663 113 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SETMARQ53H47 684 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 UBE2R2Q712K3 238 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 IGFN1Q86VF2 1251 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CRYBG2Q8N1P7 616 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TXNDC5Q8NBS9 432 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 POLE4Q9NR33 117 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ANKMY1Q9P2S6 941 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PCDHB9Q9Y5E1 797 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TRIM64CA6NLI5 447 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TLR5O60602 858 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SIX3O95343 332 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PIRTP0C851 137 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 MAPKAPK2P49137 400 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 NDUFV1P49821 464 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 LINC00471Q8N535 108 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 FAM46DQ8NEK8 389 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 OR52J3Q8NH60 311 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CIPCQ9C0C6 399 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SNTG1Q9NSN8 517 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 RAB23Q9ULC3 237 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TRPV2Q9Y5S1 764 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CCNYL3P0C7X3 344 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 IFI30P13284 250 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 IL7RP16871 459 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PNLIPRP1P54315 467 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CXCR4P61073 352 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF252P-AS1Q0IIN9 211 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SERINC3Q13530 473 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 IFI44LQ53G44 452 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 SIRPB2Q5JXA9 342 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 PLEKHH3Q7Z736 793 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 CNPPD1Q9BV87 410 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 HERC2P3Q9BVR0 1158 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 TRIT1Q9H3H1 467 aaKnown RBP4.7□□□□□ -1.66
CSMD3-203ENST00000343508 FAM105AQ9NUU6 356 aa4.7□□□□□ -1.66
CSMD3-203ENST00000343508 XPNPEP2O43895 674 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PRAMEF1O95521 474 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 LMO2P25791 158 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PFKPQ01813 784 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 LRP8Q14114 963 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 NCSTNQ92542 709 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SEMA3GQ9NS98 782 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 EIF2B4Q9UI10 523 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 A0A1W2PRG6 482 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CLDN11O75508 207 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MS4A2Q01362 244 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MXD1Q05195 221 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CXCL9Q07325 125 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 LAPTM5Q13571 262 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF697Q5TEC3 545 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CLEC4CQ8WTT0 213 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CREB3L1Q96BA8 519 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 DMRTB1Q96MA1 342 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SPATA9Q9BWV2 254 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 TMEM138Q9NPI0 162 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms