RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 PCDHGB7Q9Y5F8 929 aa14.97□□□□□ -0.01
COL11A2-201ENST00000341947 CLCA3PQ9Y6N3 262 aa14.97□□□□□ -0.01
COL11A2-201ENST00000341947 CPED1A4D0V7 1026 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 REM1O75628 298 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 ECT2LQ008S8 904 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 OC90Q02509 493 aaPredicted RBP14.96□□□□□ -0.01
COL11A2-201ENST00000341947 MFSD5Q6N075 450 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 CLNKQ7Z7G1 428 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 NKD1Q969G9 470 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 DGCR14Q96DF8 476 aaKnown RBP14.96□□□□□ -0.01
COL11A2-201ENST00000341947 DUSP26Q9BV47 211 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 TBL1XR1Q9BZK7 514 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 RABGGTBP53611 331 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 ANKRD22Q5VYY1 191 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 RAB43Q86YS6 212 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 SGCDQ92629 289 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 UFD1Q92890 307 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 CENPNQ96H22 339 aaPredicted RBP14.96□□□□□ -0.01
COL11A2-201ENST00000341947 DGAT2Q96PD7 388 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 FANCFQ9NPI8 374 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 PCDHB11Q9Y5F2 797 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 A0A1W2PRU2 124 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 AP1S2P56377 157 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 FCHO2Q0JRZ9 810 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 GDPD4Q6W3E5 623 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 USP30Q70CQ3 517 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 RBM15BQ8NDT2 890 aaKnown RBP14.96□□□□□ -0.01
COL11A2-201ENST00000341947 DNAJB8Q8NHS0 232 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 FAM110BQ8TC76 370 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 C8orf48Q96LL4 319 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 CBFA2T3O75081 653 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 ADH5P11766 374 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 POU2F1P14859 743 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 ZNF460Q14592 562 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 ARSIQ5FYB1 569 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 C6orf52Q5T4I8 152 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 KCT2Q8NC54 265 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 PIWIL1Q96J94 861 aaKnown RBP14.96□□□□□ -0.01
COL11A2-201ENST00000341947 CLDND1Q9NY35 253 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 CNTN6Q9UQ52 1028 aa14.96□□□□□ -0.01
COL11A2-201ENST00000341947 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.01
COL11A2-201ENST00000341947 DUXAA6NLW8 204 aa14.96□□□□□ -0.02
COL11A2-201ENST00000341947 PCDH7O60245 1069 aa14.96□□□□□ -0.02
COL11A2-201ENST00000341947 GDI1P31150 447 aa14.96□□□□□ -0.02
COL11A2-201ENST00000341947 C2orf27AQ580R0 203 aa14.96□□□□□ -0.02
COL11A2-201ENST00000341947 THUMPD1Q9NXG2 353 aaKnown RBP14.96□□□□□ -0.02
COL11A2-201ENST00000341947 GNB5O14775 395 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 IRAK2O43187 625 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 ACP5P13686 325 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SYVN1Q86TM6 617 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 NUDT13Q86X67 352 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 DGKBQ9Y6T7 804 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SPATA31D1Q6ZQQ2 1576 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 CAPN8A6NHC0 703 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 C9JVG2 144 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 PRKCHP24723 683 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 JAM2P57087 298 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 TOR1AIP1Q5JTV8 583 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 ZDHHC21Q8IVQ6 265 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SLC13A3Q8WWT9 602 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SHDQ96IW2 340 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 MED28Q9H204 178 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 TBC1D17Q9HA65 648 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 TAS2R7Q9NYW3 318 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 IGSF9Q9P2J2 1179 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 FKBP7Q9Y680 259 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 GSTT2BP0CG30 244 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 EFNA1P20827 205 aaPredicted RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 DPY19L1Q2PZI1 675 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 KLHL22Q53GT1 634 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 CAND1Q86VP6 1230 aaKnown RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 CHERPQ8IWX8 916 aaKnown RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 ZNF781Q8N8C0 355 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SLC25A36Q96CQ1 311 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SCLYQ96I15 445 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 HAPLN3Q96S86 360 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 HBEGFQ99075 208 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 FAM149AA5PLN7 773 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 TRMUO75648 421 aaKnown RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 PIM1P11309 404 aaPredicted RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 CXCR1P25024 350 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SLC29A4Q7RTT9 530 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 HTRA1Q92743 480 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 GMEB2Q9UKD1 530 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 NOX1Q9Y5S8 564 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 K7EPI3 171 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SAP18O00422 153 aaKnown RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 ZNF8P17098 575 aaPredicted RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SLC1A2P43004 574 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 TXNL4AP83876 142 aaKnown RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 KIAA0930Q6ICG6 404 aaPredicted RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 PDPRQ8NCN5 879 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 DNAJA4Q8WW22 397 aaPredicted RBP14.95□□□□□ -0.02
COL11A2-201ENST00000341947 OVCA2Q8WZ82 227 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 HPS1Q92902 700 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 TNFRSF25Q93038 417 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 FAXDC2Q96IV6 333 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 SUV39H2Q9H5I1 410 aa14.95□□□□□ -0.02
COL11A2-201ENST00000341947 H0YGN5 161 aa14.94□□□□□ -0.02
COL11A2-201ENST00000341947 ARCN1P48444 511 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms