RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 EMX2Q04743 252 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 IHHQ14623 411 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 FAM214AQ32MH5 1076 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 PPP3R2Q96LZ3 170 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 BARD1Q99728 777 aaKnown RBP13.87□□□□□ -0.19
PCDH8-201ENST00000338862 SH3GL1Q99961 368 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 SMOC2Q9H3U7 446 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 ZBTB20Q9HC78 741 aaPredicted RBP13.87□□□□□ -0.19
PCDH8-201ENST00000338862 SPASTQ9UBP0 616 aa13.87□□□□□ -0.19
PCDH8-201ENST00000338862 LCHNA4D1U4 455 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 ASPDHA6ND91 283 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 MYADML2A6NDP7 307 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 HHLA1C9JL84 531 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 EEDO75530 441 aaKnown RBP13.86□□□□□ -0.19
PCDH8-201ENST00000338862 GBAP04062 536 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 TACR2P21452 398 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 CRATP43155 626 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 PON2Q15165 354 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 C9orf131Q5VYM1 1079 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 TRAF7Q6Q0C0 670 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 FAM217AQ8IXS0 508 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 LEMD2Q8NC56 503 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 FBXO44Q9H4M3 255 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 FAM124BQ9H5Z6 455 aaPredicted RBP13.86□□□□□ -0.19
PCDH8-201ENST00000338862 CARS2Q9HA77 564 aaKnown RBP13.86□□□□□ -0.19
PCDH8-201ENST00000338862 TMEM161AQ9NX61 479 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 DNMT3AQ9Y6K1 912 aaPredicted RBP13.86□□□□□ -0.19
PCDH8-201ENST00000338862 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.86□□□□□ -0.19
PCDH8-201ENST00000338862 KPNA5O15131 536 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 PRAMEF1O95521 474 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 F2P00734 622 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 HTR1EP28566 365 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 EPHA2P29317 976 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 OR1E2P47887 323 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 MASP1P48740 699 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 SLC11A2P49281 568 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 UPP1Q16831 310 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 FAM180BQ6P0A1 224 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 TPGS1Q6ZTW0 290 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 SETD9Q8NE22 299 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 GTPBP3Q969Y2 492 aaKnown RBP13.86□□□□□ -0.19
PCDH8-201ENST00000338862 LGALS12Q96DT0 336 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 MYEOVQ96EZ4 313 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 DUSP12Q9UNI6 340 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 NDUFB5O43674 189 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 TSC22D2O75157 780 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 DCTP40126 519 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 TUSC3Q13454 348 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 CDH18Q13634 790 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 KCNJ8Q15842 424 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 SPANXN2Q5MJ10 180 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 RBM48Q5RL73 367 aaKnown RBP13.86□□□□□ -0.19
PCDH8-201ENST00000338862 NEK10Q6ZWH5 1172 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 TMEM179BQ7Z7N9 219 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 ZFAND4Q86XD8 727 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 ALPK1Q96QP1 1244 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 TNKS2Q9H2K2 1166 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 RNF167Q9H6Y7 350 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 GIMAP4Q9NUV9 329 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 CD84Q9UIB8 345 aa13.86□□□□□ -0.19
PCDH8-201ENST00000338862 A0A096LPI6 279 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 WDR47O94967 919 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 KRT6AP02538 564 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 KRT6BP04259 564 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 ZNF7P17097 686 aaPredicted RBP13.85□□□□□ -0.19
PCDH8-201ENST00000338862 C21orf33P30042 268 aaPredicted RBP13.85□□□□□ -0.19
PCDH8-201ENST00000338862 KRT6CP48668 564 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 PRIM2P49643 509 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 CCL23P55773 120 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 NKG7Q16617 165 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 ARMC4Q5T2S8 1044 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 RGL4Q8IZJ4 473 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 MDGA1Q8NFP4 955 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 IRGQQ8WZA9 623 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 PPP1R14BQ96C90 147 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 COPS4Q9BT78 406 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 RMND5AQ9H871 391 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 TMEM9Q9P0T7 183 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 WDR37Q9Y2I8 494 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 INSIG1O15503 277 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 BMP4P12644 408 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 MZF1P28698 734 aaPredicted RBP13.85□□□□□ -0.19
PCDH8-201ENST00000338862 GJA8P48165 433 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 ATP4BP51164 291 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 HK3P52790 923 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 CYP4Z1Q86W10 505 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 SERPINA9Q86WD7 417 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 ARRDC2Q8TBH0 407 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 ABCD2Q9UBJ2 740 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 PCDHB14Q9Y5E9 798 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 FER1L6Q2WGJ9 1857 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 QSER1Q2KHR3 1735 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 CHRNA1P02708 482 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 ATXN1LP0C7T5 689 aaKnown RBP13.85□□□□□ -0.19
PCDH8-201ENST00000338862 CDK5R2Q13319 367 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 SF3B4Q15427 424 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCDH8-201ENST00000338862 USP41Q3LFD5 358 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 ADPRMQ3LIE5 342 aa13.85□□□□□ -0.19
PCDH8-201ENST00000338862 GDF6Q6KF10 455 aaPredicted RBP13.85□□□□□ -0.19
PCDH8-201ENST00000338862 DERL2Q9GZP9 239 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms