RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 CMTM5Q96DZ9 223 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 BTBD10Q9BSF8 475 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 TBC1D10AQ9BXI6 508 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 OR52A5Q9H2C5 316 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 AKTIPQ9H8T0 292 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 PFDN4Q9NQP4 134 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 ITM2CQ9NQX7 267 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 TAS2R1Q9NYW7 299 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 SLC23A2Q9UGH3 650 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 PTGDR2Q9Y5Y4 395 aa15.08■□□□□ 0.01
LIMS1-202ENST00000338045 COPG1Q9Y678 874 aaKnown RBP15.08■□□□□ 0.01
LIMS1-202ENST00000338045 KMOO15229 486 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 C1orf105O95561 183 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 IGLV3-19P01714 112 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 CAPN1P07384 714 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 EBLN1P0CF75 366 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 PIK3R1P27986 724 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 MAT2AP31153 395 aaKnown RBP15.08■□□□□ 0
LIMS1-202ENST00000338045 ACSL1P33121 698 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 MAGEA9P43362 315 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 DGKEP52429 567 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 FAM83HQ6ZRV2 1179 aaPredicted RBP15.08■□□□□ 0
LIMS1-202ENST00000338045 RINLQ6ZS11 566 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 SYT13Q7L8C5 426 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 FAM124AQ86V42 546 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 DDIASQ8IXT1 998 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 DCBLD1Q8N8Z6 715 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 OR2T34Q8NGX1 318 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 ATL1Q8WXF7 558 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 ATP6V1E2Q96A05 226 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 MIPEPQ99797 713 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 BTBD1Q9H0C5 482 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 RMI1Q9H9A7 625 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 TRPS1Q9UHF7 1281 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 POLG2Q9UHN1 485 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 BTRCQ9Y297 605 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 SLC17A4Q9Y2C5 497 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 PRKAB1Q9Y478 270 aa15.08■□□□□ 0
LIMS1-202ENST00000338045 ZFC3H1O60293 1989 aaKnown RBP15.07■□□□□ 0
LIMS1-202ENST00000338045 KRT87PA6NCN2 255 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 UBDO15205 165 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 SLC31A1O15431 190 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 HOXC4P09017 264 aaPredicted RBP15.07■□□□□ 0
LIMS1-202ENST00000338045 LINC00032P0C843 101 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 CPA2P48052 419 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 ATP4BP51164 291 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 PFN3P60673 137 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 DMPKQ09013 629 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 PLA2G4EQ3MJ16 856 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 CCSMST1Q4G0I0 132 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 HABP4Q5JVS0 413 aaKnown RBP15.07■□□□□ 0
LIMS1-202ENST00000338045 PRPF38BQ5VTL8 546 aaKnown RBP15.07■□□□□ 0
LIMS1-202ENST00000338045 OGFOD2Q6N063 350 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 METTL6Q8TCB7 284 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 UTP4Q969X6 686 aaKnown RBP15.07■□□□□ 0
LIMS1-202ENST00000338045 APOOQ9BUR5 198 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 C1orf21Q9H246 121 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 SGK2Q9HBY8 427 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 POLMQ9NP87 494 aaPredicted RBP15.07■□□□□ 0
LIMS1-202ENST00000338045 STOX2Q9P2F5 926 aaPredicted RBP15.07■□□□□ 0
LIMS1-202ENST00000338045 EBF1Q9UH73 591 aa15.07■□□□□ 0
LIMS1-202ENST00000338045 B2RBV5 119 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 H0YHG0 523 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 WDR47O94967 919 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 FUCA1P04066 466 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 CEACAM5P06731 702 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 KRT16P08779 473 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 HGFP14210 728 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 BDKRB1P46663 353 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 MNAT1P51948 309 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 SQLEQ14534 574 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 HERC3Q15034 1050 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 METRNLQ641Q3 311 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 UNC5DQ6UXZ4 953 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 PDZD3Q86UT5 571 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 DEFB123Q8N688 67 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 MARK4Q96L34 752 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 PKP4Q99569 1192 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 ZDHHC5Q9C0B5 715 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 FZD3Q9NPG1 666 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 CA14Q9ULX7 337 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 G3BP2Q9UN86 482 aaKnown RBP15.06■□□□□ 0
LIMS1-202ENST00000338045 LRRC72A6NJI9 287 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 GYG2O15488 501 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 LATO43561 262 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 SLC16A8O95907 504 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 ALDOCP09972 364 aaKnown RBP15.06■□□□□ 0
LIMS1-202ENST00000338045 COX4I1P13073 169 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 LBPP18428 481 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 IMPA1P29218 277 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 IRX1P78414 480 aaPredicted RBP15.06■□□□□ 0
LIMS1-202ENST00000338045 TFF2Q03403 129 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 GGTA1PQ4G0N0 100 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 TCHHL1Q5QJ38 904 aaPredicted RBP15.06■□□□□ 0
LIMS1-202ENST00000338045 AGTRAPQ6RW13 159 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 POU5F2Q8N7G0 328 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 RBM15BQ8NDT2 890 aaKnown RBP15.06■□□□□ 0
LIMS1-202ENST00000338045 OR56A3Q8NH54 315 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 HMGB4Q8WW32 186 aa15.06■□□□□ 0
LIMS1-202ENST00000338045 PYCR2Q96C36 320 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms