RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TMPRSS12Q86WS5 348 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 PLXDC1Q8IUK5 500 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 GALNT15Q8N3T1 639 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 MREGQ8N565 214 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 FBXO15Q8NCQ5 510 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 OR52E1Q8NGJ3 308 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 DHRS4Q9BTZ2 278 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 ZMYND15Q9H091 742 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 HRASLS2Q9NWW9 162 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 PSMC3IPQ9P2W1 217 aaPredicted RBP11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 CTNNAL1Q9UBT7 734 aa11.58□□□□□ -0.56
SPTLC1-202ENST00000337841 LRP4O75096 1905 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 A0A087X1B8 175 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 A0A1W2PQM1 296 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 CCDC151A5D8V7 595 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 OR6C74A6NCV1 312 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ZNF839A8K0R7 811 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 TRIM49D1C9J1S8 452 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 MATN2O00339 956 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 NTN3O00634 580 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 PHGDHO43175 533 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 MPOP05164 745 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 C2P06681 752 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 NUDT17P0C025 328 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 CCDC166P0CW27 439 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ZNF37AP17032 561 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 PGGT1BP53609 377 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ATP6V0D1P61421 351 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 INSM1Q01101 510 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 SP140Q13342 867 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ZNF460Q14592 562 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ZKSCAN8Q15776 578 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 TAF1BQ53T94 588 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 N4BP2L1Q5TBK1 243 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 TMEM71Q6P5X7 295 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 WDR74Q6RFH5 385 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 TMEM207Q6UWW9 146 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 OOSP2Q86WS3 158 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 TDRPQ86YL5 185 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 CACTIN-AS1Q8N1I8 211 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 MYRIPQ8NFW9 859 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 OR9A1PQ8NGU1 263 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 JPH3Q8WXH2 748 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 GRAMD1AQ96CP6 724 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ZDHHC12Q96GR4 267 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 TMEM74Q96NL1 305 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 RAB11FIP5Q9BXF6 653 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 SLC12A9Q9BXP2 914 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ROPN1BQ9BZX4 212 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 DERL2Q9GZP9 239 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ROPN1Q9HAT0 212 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 PARVBQ9HBI1 364 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 NMRAL1Q9HBL8 299 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 SNX15Q9NRS6 342 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 OR6C2Q9NZP2 312 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 EPHA6Q9UF33 1036 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ATXN7L1Q9ULK2 861 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 RUVBL2Q9Y230 463 aaKnown RBP11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 WDR87Q6ZQQ6 2873 aa11.57□□□□□ -0.56
SPTLC1-202ENST00000337841 ARID1BQ8NFD5 2236 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 COL5A1P20908 1838 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 A0A096LPK6 155 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 TLDC2A0PJX2 215 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 HMX2A2RU54 273 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 RASGRF2O14827 1237 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 CTIFO43310 598 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 TSPAN12O95859 305 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 SYF2O95926 243 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 MT-ND3P03897 115 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 SHBGP04278 402 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 ENO2P09104 434 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 BDKRB1P46663 353 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 RAB28P51157 221 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 ARHGAP19Q14CB8 494 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 RASA2Q15283 850 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 FAM83EQ2M2I3 478 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 CDCP2Q5VXM1 449 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 TIFABQ6ZNK6 161 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 CMC1Q7Z7K0 106 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 CHCHD4Q8N4Q1 142 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 OR4D9Q8NGE8 314 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 ANKRD49Q8WVL7 239 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 HNRNPLLQ8WVV9 542 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 SLC22A18Q96BI1 424 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 CABS1Q96KC9 395 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 CCDC138Q96M89 665 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 TSNARE1Q96NA8 513 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 DEPDC7Q96QD5 511 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 PKP4Q99569 1192 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 RAB33BQ9H082 229 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 VPS11Q9H270 941 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 XKR8Q9H6D3 395 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 RDH14Q9HBH5 336 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 AKAP7Q9P0M2 348 aaPredicted RBP11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 SPATA7Q9P0W8 599 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 MYO15AQ9UKN7 3530 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 NOVA2Q9UNW9 492 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 CLCA2Q9UQC9 943 aa11.56□□□□□ -0.56
SPTLC1-202ENST00000337841 ENTPD2Q9Y5L3 495 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms