RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 KLHDC8BQ8IXV7 354 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 SYTL1Q8IYJ3 562 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 TBC1D21Q8IYX1 336 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 ADGRF3Q8IZF5 1079 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 FAM26EQ8N5C1 309 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 TMEM102Q8N9M5 508 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-202ENST00000337571 OR6P1Q8NGX9 317 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 MIB2Q96AX9 1013 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 SGSM3Q96HU1 749 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 PITPNM3Q9BZ71 974 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 PCMTD2Q9NV79 361 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 ANKMY1Q9P2S6 941 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 ANAPC5Q9UJX4 755 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-202ENST00000337571 ZNF148Q9UQR1 794 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 ZNF451Q9Y4E5 1061 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 PCDHGB7Q9Y5F8 929 aa10.32□□□□□ -0.76
CAPN3-202ENST00000337571 PCDHGA9Q9Y5G4 932 aaKnown RBP10.32□□□□□ -0.76
CAPN3-202ENST00000337571 HEATR9A2RTY3 570 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 A6NL46 340 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 ISM1B1AKI9 464 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 ZNF185O15231 689 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 RPN2P04844 631 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 PVRP15151 417 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 RORAP35398 523 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 PTGIRP43119 386 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 ABRQ12979 859 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 KLF1Q13351 362 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-202ENST00000337571 NCF4Q15080 339 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 CCDC38Q502W7 563 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 SEL1L2Q5TEA6 688 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 MLIPQ5VWP3 458 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 CPZQ66K79 652 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 LCN10Q6JVE6 187 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 PACS1Q6VY07 963 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 CDHR3Q6ZTQ4 885 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 NLRP9Q7RTR0 991 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 HPS6Q86YV9 775 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 PIANPQ8IYJ0 282 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 OR52K1Q8NGK4 314 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 OR5AR1Q8NGP9 310 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 OR5K2Q8NHB8 316 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 GSDMBQ8TAX9 411 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 SLC35B2Q8TB61 432 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 CPT1CQ8TCG5 803 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 UBE2Q2Q8WVN8 375 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 HDAC10Q969S8 669 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 IP6K3Q96PC2 410 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 DHRS4Q9BTZ2 278 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 FRMD8P1Q9BZ68 369 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-202ENST00000337571 RBSNQ9H1K0 784 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 LRRC4CQ9HCJ2 640 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 SLAMF7Q9NQ25 335 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 TXLNGQ9NUQ3 528 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 OR6C2Q9NZP2 312 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 NDOR1Q9UHB4 597 aa10.31□□□□□ -0.76
CAPN3-202ENST00000337571 TNRC6AQ8NDV7 1962 aaKnown RBP10.31□□□□□ -0.76
CAPN3-202ENST00000337571 PIKFYVEQ9Y2I7 2098 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 PRRC2CQ9Y520 2896 aaKnown RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 CCDC162PA2VCL2 907 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 GOLGA6L6A8MZA4 724 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 PEX12O00623 359 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 KLHL41O60662 606 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 DPM1O60762 260 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 IFNB1P01574 187 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 IGHEP01854 428 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 PDGFAP04085 211 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 CHRM5P08912 532 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 UGT2B7P16662 529 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 ADRA1DP25100 572 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 VARSP26640 1264 aaKnown RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 OTX2P32243 289 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 FDFT1P37268 417 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 CD97P48960 835 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 CSE1LP55060 971 aaKnown RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 GDF10P55107 478 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 PRAMEP78395 509 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 PTCHD3Q3KNS1 767 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 ZNF658BQ4V348 819 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 FASTKD1Q53R41 847 aaKnown RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 TTC23LQ6PF05 361 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 AFTPHQ6ULP2 937 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 RNF10Q8N5U6 811 aaKnown RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 CCDC89Q8N998 374 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 C19orf47Q8N9M1 422 aaKnown RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 OR4L1Q8NH43 312 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 ADAMTS17Q8TE56 1095 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 ASZ1Q8WWH4 475 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 SLC22A18Q96BI1 424 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 HES6Q96HZ4 224 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 FER1L6-AS2Q96M78 137 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 NRTNQ99748 197 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 NDC1Q9BTX1 674 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 ETNK1Q9HBU6 452 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 MLXIPLQ9NP71 852 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 GPR83Q9NYM4 423 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 MAP10Q9P2G4 905 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 IFT80Q9P2H3 777 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-202ENST00000337571 IMPACTQ9P2X3 320 aa10.3□□□□□ -0.76
CAPN3-202ENST00000337571 ICKQ9UPZ9 632 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms