RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 METTL2AQ96IZ6 378 aaKnown RBP20.23■□□□□ 0.83
SPNS1-203ENST00000334536 ZFYVE19Q96K21 471 aa20.23■□□□□ 0.83
SPNS1-203ENST00000334536 FEM1AQ9BSK4 669 aa20.23■□□□□ 0.83
SPNS1-203ENST00000334536 TRIM39Q9HCM9 518 aa20.23■□□□□ 0.83
SPNS1-203ENST00000334536 TOR4AQ9NXH8 423 aa20.23■□□□□ 0.83
SPNS1-203ENST00000334536 POLHQ9Y253 713 aa20.23■□□□□ 0.83
SPNS1-203ENST00000334536 HMX3A6NHT5 357 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 OR6C75A6NL08 312 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 C12orf71A8MTZ7 269 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 TRIM77I1YAP6 450 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 MRPS14O60783 128 aaKnown RBP20.22■□□□□ 0.83
SPNS1-203ENST00000334536 KATNA1O75449 491 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 INMTO95050 263 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 ALDOCP09972 364 aaKnown RBP20.22■□□□□ 0.83
SPNS1-203ENST00000334536 ARSFP54793 590 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 ZNF404Q494X3 552 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 C10orf120Q5SQS8 335 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 VARS2Q5ST30 1063 aaKnown RBP20.22■□□□□ 0.83
SPNS1-203ENST00000334536 KANK2Q63ZY3 851 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 RGMBQ6NW40 437 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 CYP20A1Q6UW02 462 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 LURAP1LQ8IV03 231 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 SPNS2Q8IVW8 549 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 SETD6Q8TBK2 473 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 BLOC1S5Q8TDH9 187 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 FAR1Q8WVX9 515 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 C3orf30Q96M34 536 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 ATOH8Q96SQ7 321 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 VPS4AQ9UN37 437 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 DNAJC15Q9Y5T4 150 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 SLC12A8A0AV02 714 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 CAPN5O15484 640 aaPredicted RBP20.22■□□□□ 0.83
SPNS1-203ENST00000334536 TBC1D4O60343 1298 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 MATN4O95460 622 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 CYP2A7P20853 494 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 CFL1P23528 166 aaKnown RBP20.22■□□□□ 0.83
SPNS1-203ENST00000334536 CTGFP29279 349 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 OR1E1P30953 314 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 OR1G1P47890 313 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 FAM189BP81408 668 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 TMEM236Q5W0B7 351 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 SLC24A5Q71RS6 500 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 MIER2Q8N344 545 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 PNPLA1Q8N8W4 532 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 LHFPL5Q8TAF8 219 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 NARFLQ9H6Q4 476 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 PDFQ9HBH1 243 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 MID1IP1Q9NPA3 183 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 NOD1Q9Y239 953 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 ARL5AQ9Y689 179 aa20.22■□□□□ 0.83
SPNS1-203ENST00000334536 A0A0G2JMP0 313 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 TBX18O95935 607 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 SERPINF2P08697 491 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 TSPAN8P19075 237 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 CST5P28325 142 aaPredicted RBP20.21■□□□□ 0.83
SPNS1-203ENST00000334536 ACVRL1P37023 503 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 STC1P52823 247 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 MVKQ03426 396 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 OR4D1Q15615 310 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 KIF19Q2TAC6 998 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 COQ5Q5HYK3 327 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 CLLU1OSQ5K130 101 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 SYT6Q5T7P8 510 aaPredicted RBP20.21■□□□□ 0.83
SPNS1-203ENST00000334536 PTRH1Q86Y79 214 aaKnown RBP20.21■□□□□ 0.83
SPNS1-203ENST00000334536 PLD3Q8IV08 490 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 OR9I1Q8NGQ6 314 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 SH3RF2Q8TEC5 729 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 TSPEARQ8WU66 669 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 TWIST2Q8WVJ9 160 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 KIAA1191Q96A73 305 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 DERL2Q9GZP9 239 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 FBRSL1Q9HCM7 1045 aaKnown RBP20.21■□□□□ 0.83
SPNS1-203ENST00000334536 MKLN1Q9UL63 735 aa20.21■□□□□ 0.83
SPNS1-203ENST00000334536 A0A0J9YYE9 177 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 TCRBV5S2A0A599 114 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 NME4O00746 187 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 ARPC2O15144 300 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 TPST1O60507 370 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 KERAO60938 352 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 SOAT2O75908 522 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 MTHFD2P13995 350 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 LBPP18428 481 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 SEPHS1P49903 392 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 CDH13P55290 713 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 MRPL58Q14197 206 aaKnown RBP20.2■□□□□ 0.83
SPNS1-203ENST00000334536 SEMA3AQ14563 771 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 STARD3Q14849 445 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 CTXN3Q4LDR2 81 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 LAYNQ6UX15 382 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 RTN4RL1Q86UN2 441 aaPredicted RBP20.2■□□□□ 0.83
SPNS1-203ENST00000334536 MIB1Q86YT6 1006 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 TCAIMQ8N3R3 496 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 RYBPQ8N488 228 aaPredicted RBP20.2■□□□□ 0.83
SPNS1-203ENST00000334536 STAG3L4Q8TBR4 150 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 APOL4Q9BPW4 351 aa20.2■□□□□ 0.83
SPNS1-203ENST00000334536 TRAF4Q9BUZ4 470 aaPredicted RBP20.2■□□□□ 0.83
SPNS1-203ENST00000334536 NLE1Q9NVX2 485 aaPredicted RBP20.2■□□□□ 0.83
SPNS1-203ENST00000334536 TTC3P53804 2025 aa20.2■□□□□ 0.82
SPNS1-203ENST00000334536 ATP6AP2A0A1C7CYW4 349 aa20.2■□□□□ 0.82
SPNS1-203ENST00000334536 METTL15A6NJ78 407 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms