RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PPP1R14AQ96A00 147 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 HIC2Q96JB3 615 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 GPR22Q99680 433 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 OXSMQ9NWU1 459 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 CLN6Q9NWW5 311 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 ITGB4P16144 1822 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 K7ERQ8 282 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 TULP3O75386 442 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 PREPP48147 710 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 LIPEQ05469 1076 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 SCAPQ12770 1279 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 MBOAT1Q6ZNC8 495 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 HPS6Q86YV9 775 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 CADM2Q8N3J6 435 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 TEX47Q8TBZ9 253 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 KLHL25Q9H0H3 589 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 ADAP2Q9NPF8 381 aa14.72□□□□□ -0.05
C9orf47-201ENST00000334490 NLE1Q9NVX2 485 aaPredicted RBP14.72□□□□□ -0.05
C9orf47-201ENST00000334490 MYH14Q7Z406 1995 aaKnown RBP14.71□□□□□ -0.05
C9orf47-201ENST00000334490 A8MU76 341 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 FAM25AB3EWG3 89 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 FAM25CB3EWG5 89 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 FAM25GB3EWG6 89 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 CBSLP0DN79 551 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 CBSP35520 551 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 IDH3AP50213 366 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 NUDT13Q86X67 352 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 GKN2Q86XP6 184 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 SPPL2CQ8IUH8 684 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 DEPDC4Q8N2C3 294 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 ZBED6CLQ96FA7 236 aaPredicted RBP14.71□□□□□ -0.05
C9orf47-201ENST00000334490 ANKRD27Q96NW4 1050 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 VPS29Q9UBQ0 182 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 CDC14AQ9UNH5 594 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 ERI3O43414 337 aaKnown RBP14.71□□□□□ -0.05
C9orf47-201ENST00000334490 TCEA3O75764 348 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 GDF5P43026 501 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 RPS21P63220 83 aaKnown RBP14.71□□□□□ -0.05
C9orf47-201ENST00000334490 ZBTB6Q15916 424 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 ALKBH2Q6NS38 261 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 KCT2Q8NC54 265 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 PHOSPHO2Q8TCD6 241 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 PMEPA1Q969W9 287 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 MAGEE1Q9HCI5 957 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 ZDHHC7Q9NXF8 308 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 RAPGEFL1Q9UHV5 662 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 A0A087WXM4 84 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 MAGEB17A8MXT2 336 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 GSRP00390 522 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 ANPEPP15144 967 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 PTCHD3Q3KNS1 767 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 RAB6CQ53S08 254 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 TBC1D21Q8IYX1 336 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 APCDD1Q8J025 514 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 TXNDC5Q8NBS9 432 aaKnown RBP14.71□□□□□ -0.05
C9orf47-201ENST00000334490 AGAP11Q8TF27 550 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 DGCR6LQ9BY27 220 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 RAB6CQ9H0N0 254 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 SLITRK2Q9H156 845 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 ZC4H2Q9NQZ6 224 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 SPATA6Q9NWH7 488 aaPredicted RBP14.71□□□□□ -0.05
C9orf47-201ENST00000334490 HCFC1R1Q9NWW0 138 aa14.71□□□□□ -0.05
C9orf47-201ENST00000334490 PDPK1O15530 556 aa14.71□□□□□ -0.06
C9orf47-201ENST00000334490 MAFKO60675 156 aa14.71□□□□□ -0.06
C9orf47-201ENST00000334490 MLLT3P42568 568 aaPredicted RBP14.71□□□□□ -0.06
C9orf47-201ENST00000334490 FRG2Q64ET8 278 aa14.71□□□□□ -0.06
C9orf47-201ENST00000334490 AGTRAPQ6RW13 159 aa14.71□□□□□ -0.06
C9orf47-201ENST00000334490 GLB1L3Q8NCI6 653 aaPredicted RBP14.71□□□□□ -0.06
C9orf47-201ENST00000334490 HM13Q8TCT9 377 aa14.71□□□□□ -0.06
C9orf47-201ENST00000334490 Q96MT0 163 aa14.71□□□□□ -0.06
C9orf47-201ENST00000334490 FRG2BQ96QU4 278 aa14.71□□□□□ -0.06
C9orf47-201ENST00000334490 DUSP26Q9BV47 211 aa14.71□□□□□ -0.06
C9orf47-201ENST00000334490 GSC2O15499 205 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 PRG2P13727 222 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 TYRP1P17643 537 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 SLC10A2Q12908 348 aaPredicted RBP14.7□□□□□ -0.06
C9orf47-201ENST00000334490 KLHL12Q53G59 568 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 GALNT18Q6P9A2 607 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 SIX5Q8N196 739 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 TERB1Q8NA31 727 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 NCSTNQ92542 709 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 NMD3Q96D46 503 aaKnown RBP14.7□□□□□ -0.06
C9orf47-201ENST00000334490 GPR174Q9BXC1 333 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 MCOLN1Q9GZU1 580 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 LINC00597Q9H2U6 94 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 A0A1W2PQU0 124 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 ZBTB42B2RXF5 422 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 UBXN7O94888 489 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 WDR4P57081 412 aaKnown RBP14.7□□□□□ -0.06
C9orf47-201ENST00000334490 RPL6Q02878 288 aaKnown RBP14.7□□□□□ -0.06
C9orf47-201ENST00000334490 SEMA3AQ14563 771 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 LRRC70Q7Z2Q7 622 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 HEATR4Q86WZ0 1026 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 CAMKVQ8NCB2 501 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 SLC13A3Q8WWT9 602 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 LPGAT1Q92604 370 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 CDCA3Q99618 268 aaPredicted RBP14.7□□□□□ -0.06
C9orf47-201ENST00000334490 LCHNA4D1U4 455 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 TMEM189-UBE2V1I3L0A0 370 aa14.7□□□□□ -0.06
C9orf47-201ENST00000334490 DLX3O60479 287 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms