RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PHTF2Q8N3S3 785 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 FEM1CQ96JP0 617 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 TM9SF2Q99805 663 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 EQTNQ9NQ60 294 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ASB4Q9Y574 426 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 CDK4P11802 303 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 CCR1P32246 355 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ALG1LQ6GMV1 187 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF550Q7Z398 422 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 SPPL2CQ8IUH8 684 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 SCRN2Q96FV2 425 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 CDK5RAP1Q96SZ6 601 aaKnown RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 TTYH2Q9BSA4 534 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 UCK2Q9BZX2 261 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 GPATCH2LQ9NWQ4 482 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 CALCAP01258 141 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 CTSEP14091 401 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 MANFP55145 182 aaKnown RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 NPTX1Q15818 432 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 OR52E8Q6IFG1 317 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF598Q86UK7 904 aaKnown RBP10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 LZTR1Q8N653 840 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 NME7Q9Y5B8 376 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 HSPE1-MOB4S4R3N1 261 aa10.18□□□□□ -0.78
SPTBN1-201ENST00000333896 LOC100130705A0A1B0GUX0 176 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ABCC3O15438 1527 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 RNASEH2AO75792 299 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 DNASE1P24855 282 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 KRBOX4Q5JUW0 171 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 GLYATQ6IB77 296 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 FAM83AQ86UY5 434 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 C12orf45Q8N5I9 185 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 FBXL3Q9UKT7 428 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 VWDEQ8N2E2 1590 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 CREBL2O60519 120 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 RPL38P63173 70 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 TRIM28Q13263 835 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 FAM199XQ6PEV8 388 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF557Q8N988 423 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 KIAA0895Q8NCT3 520 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 CELF6Q96J87 481 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 KLHL15Q96M94 604 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ASCC3Q8N3C0 2202 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ADAM12O43184 909 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 TFPTP0C1Z6 253 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 XKR6Q5GH73 641 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 UBE2R2Q712K3 238 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 LINC00471Q8N535 108 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 LAMB1P07942 1786 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 AZIN1O14977 448 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 BMP6P22004 513 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 SLC2A5P22732 501 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 RASGEF1BQ0VAM2 473 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 EXOC3L2Q2M3D2 409 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 DALRD3Q5D0E6 543 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 XKR3Q5GH77 459 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 BEND5Q7L4P6 421 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ANKS1BQ7Z6G8 1248 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 PARGQ86W56 976 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 FAM131BQ86XD5 332 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 LGR4Q9BXB1 951 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 MTG2Q9H4K7 406 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 C1orf109Q9NX04 203 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 MTMR4Q9NYA4 1195 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 OAZ3Q9UMX2 235 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 DCDC2CA8MYV0 355 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 DGKAP23743 735 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 PBX1P40424 430 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 SLC7A5P1Q8MH63 180 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 CPT1CQ8TCG5 803 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 IFT22Q9H7X7 185 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 SNX15Q9NRS6 342 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 WDR81Q562E7 1941 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 IFNA21P01568 189 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 TSPAN8P19075 237 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 CACUL1Q86Y37 369 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 BANPQ8N9N5 519 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 C10orf90Q96M02 699 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 C8orf33Q9H7E9 229 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 DOCK11Q5JSL3 2073 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 DYRK1AQ13627 763 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNF792Q3KQV3 632 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 LSM12Q3MHD2 195 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 VTCN1Q7Z7D3 282 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ADAMTSL2Q86TH1 951 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 OR10H4Q8NGA5 316 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 BRSK1Q8TDC3 778 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 MRPS31Q92665 395 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ZUFSPQ96AP4 578 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 COQ10AQ96MF6 247 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ARHGEF4Q9NR80 690 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 AAASQ9NRG9 546 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ZNHIT2Q9UHR6 403 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 BTRCQ9Y297 605 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 ZCCHC11Q5TAX3 1644 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 SCN3AQ9NY46 2000 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 SCN1AP35498 2009 aa10.17□□□□□ -0.78
SPTBN1-201ENST00000333896 PRKYO43930 277 aa10.16□□□□□ -0.78
SPTBN1-201ENST00000333896 NPHS1O60500 1241 aa10.16□□□□□ -0.78
SPTBN1-201ENST00000333896 FARS2O95363 451 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms