RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 OXR1Q8N573 874 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 ZNF781Q8N8C0 355 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 OR13J1Q8NGT2 312 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 OR1E3Q8WZA6 343 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 VPS35Q96QK1 796 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 ECSITQ9BQ95 431 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 ASB8Q9H765 288 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 FGF22Q9HCT0 170 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 MRPL40Q9NQ50 206 aaKnown RBP13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 IL1RAPL1Q9NZN1 696 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 SLC39A10Q9ULF5 831 aa13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 OAS3Q9Y6K5 1087 aaKnown RBP13.18□□□□□ -0.3
TUBB2A-201ENST00000333628 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 GPR39O43194 453 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 ZNF883P0CG24 379 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 SLC35E2BP0CK96 405 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 STMN1P16949 149 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 JUNDP17535 347 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 ITGAXP20702 1163 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 CSRP1P21291 193 aaKnown RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 MC4RP32245 332 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 SLC26A3P40879 764 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 SLC25A3Q00325 362 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 ACVR1Q04771 509 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 GALNT1Q10472 559 aaPredicted RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 SLC14A1Q13336 389 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 ZNF648Q5T619 568 aaPredicted RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 TMEM154Q6P9G4 183 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 PIWIL4Q7Z3Z4 852 aaKnown RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 GATAD2AQ86YP4 633 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 HID1Q8IV36 788 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 AFAP1L2Q8N4X5 818 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 C2CD4AQ8NCU7 369 aaPredicted RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 PEX13Q92968 403 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 HDAC10Q969S8 669 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 TRAPPC9Q96Q05 1148 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 MRPL57Q9BQC6 102 aaKnown RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 MRPL46Q9H2W6 279 aaKnown RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 TCEAL2Q9H3H9 227 aaPredicted RBP13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 TRIM39Q9HCM9 518 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 TREX1Q9NSU2 369 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 ZNF358Q9NW07 568 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 KLQ9UEF7 1012 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 MOSPD1Q9UJG1 213 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 SLC17A4Q9Y2C5 497 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 BTBD3Q9Y2F9 522 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 SLC30A1Q9Y6M5 507 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 NCOR2Q9Y618 2525 aa13.17□□□□□ -0.3
TUBB2A-201ENST00000333628 CCDC162PA2VCL2 907 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 AGAP14A8MT82 685 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 RASGRP1O95267 797 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 PIM1P11309 404 aaPredicted RBP13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 NME1P15531 152 aaKnown RBP13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 TFEBP19484 476 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 ARCN1P48444 511 aaKnown RBP13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 CDKN1CP49918 316 aaPredicted RBP13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 CCT8P50990 548 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 HK3P52790 923 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 TBL3Q12788 808 aaKnown RBP13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 NFATC2Q13469 925 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 LRRC8EQ6NSJ5 796 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 ZFP1Q6P2D0 407 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 NAPRTQ6XQN6 538 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 NAXDQ8IW45 347 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 PHACTR4Q8IZ21 702 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 RBFAQ8N0V3 343 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 TSPAN17Q96FV3 270 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 PDXPQ96GD0 296 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 CLPTM1LQ96KA5 538 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 BTBD9Q96Q07 612 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 CYP4F12Q9HCS2 524 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 NCKIPSDQ9NZQ3 722 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 C6orf203Q9P0P8 240 aaPredicted RBP13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 ATXN10Q9UBB4 475 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 CDYLQ9Y232 598 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 POMPQ9Y244 141 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 DGKBQ9Y6T7 804 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
TUBB2A-201ENST00000333628 SPAARA0A1B0GVQ0 90 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 PRSS38A1L453 326 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 DPPA5A6NC42 116 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 OR51F1A6NGY5 319 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 SCAMP1O15126 338 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 SDC3O75056 442 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 MTX2O75431 263 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 TNFP01375 233 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 AHSGP02765 367 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 CEACAM1P13688 526 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 DGKAP23743 735 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 CD151P48509 253 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 BLKP51451 505 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 IRF9Q00978 393 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 CACNG1Q06432 222 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 CUL3Q13618 768 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 GPR33Q49SQ1 333 aa13.15□□□□□ -0.3
TUBB2A-201ENST00000333628 ZRANB3Q5FWF4 1079 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms