RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 TBC1D21Q8IYX1 336 aa18.65■□□□□ 0.58
LAMP1-201ENST00000332556 CLEC4FQ8N1N0 589 aa18.65■□□□□ 0.58
LAMP1-201ENST00000332556 AURKBQ96GD4 344 aaPredicted RBP18.65■□□□□ 0.58
LAMP1-201ENST00000332556 BEGAINQ9BUH8 593 aa18.65■□□□□ 0.58
LAMP1-201ENST00000332556 MTG2Q9H4K7 406 aa18.65■□□□□ 0.58
LAMP1-201ENST00000332556 IKZF5Q9H5V7 419 aa18.65■□□□□ 0.58
LAMP1-201ENST00000332556 ABCB8Q9NUT2 735 aa18.65■□□□□ 0.58
LAMP1-201ENST00000332556 WARS2Q9UGM6 360 aaKnown RBP18.65■□□□□ 0.58
LAMP1-201ENST00000332556 TRIM43BA6NCK2 446 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 PITPNM1O00562 1244 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 LSM1O15116 133 aaKnown RBP18.64■□□□□ 0.57
LAMP1-201ENST00000332556 TRBC1P01850 177 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 STK32CQ86UX6 486 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 PHACTR4Q8IZ21 702 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 HJURPQ8NCD3 748 aaPredicted RBP18.64■□□□□ 0.57
LAMP1-201ENST00000332556 SLC22A17Q8WUG5 538 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 FOXJ1Q92949 421 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 TRIM54Q9BYV2 358 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 NTN4Q9HB63 628 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 SLCO3A1Q9UIG8 710 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 EYSQ5T1H1 3165 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 GLYATL1P3A0A0U1RQE8 302 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 LOC730098B7Z3J9 87 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 XYLBO75191 536 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 EFEMP2O95967 443 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 PDCD4Q53EL6 469 aaKnown RBP18.64■□□□□ 0.57
LAMP1-201ENST00000332556 R3HCC1LQ7Z5L2 792 aaKnown RBP18.64■□□□□ 0.57
LAMP1-201ENST00000332556 IGFN1Q86VF2 1251 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 HS3ST5Q8IZT8 346 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 SLC6A13Q9NSD5 602 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 PCDHGA11Q9Y5H2 935 aa18.64■□□□□ 0.57
LAMP1-201ENST00000332556 TYW5A2RUC4 315 aaKnown RBP18.63■□□□□ 0.57
LAMP1-201ENST00000332556 MAN1A2O60476 641 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 CPNE6O95741 557 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 GSNP06396 782 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 ZNF7P17097 686 aaPredicted RBP18.63■□□□□ 0.57
LAMP1-201ENST00000332556 CDH3P22223 829 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 NFKBIAP25963 317 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 ITGB8P26012 769 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 WEE1P30291 646 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 EPHB3P54753 998 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 GSTM4Q03013 218 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 HSPA14Q0VDF9 509 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 RGS21Q2M5E4 152 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 TXNDC11Q6PKC3 985 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 SPATA19Q7Z5L4 167 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 ANKRD46Q86W74 232 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 CHPT1Q8WUD6 406 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 TMBIM1Q969X1 311 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 ZNF382Q96SR6 550 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 ZDHHC6Q9H6R6 413 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 CARS2Q9HA77 564 aaKnown RBP18.63■□□□□ 0.57
LAMP1-201ENST00000332556 VAPAQ9P0L0 249 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 TRIM64BA6NI03 449 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 TOR1BO14657 336 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 AXIN1O15169 862 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 PFDN6O15212 129 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 SULT1C4O75897 302 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 S100BP04271 92 aaPredicted RBP18.63■□□□□ 0.57
LAMP1-201ENST00000332556 URODP06132 367 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 CLCN4P51793 760 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 SPCS2Q15005 226 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 SF1Q15637 639 aaKnown RBP18.63■□□□□ 0.57
LAMP1-201ENST00000332556 LRRC66Q68CR7 880 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 GLYATQ6IB77 296 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 BEND7Q8N7W2 519 aaPredicted RBP18.63■□□□□ 0.57
LAMP1-201ENST00000332556 SORCS1Q8WY21 1168 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 SMURF2Q9HAU4 748 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 MRPL17Q9NRX2 175 aaKnown RBP18.63■□□□□ 0.57
LAMP1-201ENST00000332556 EXD2Q9NVH0 621 aa18.63■□□□□ 0.57
LAMP1-201ENST00000332556 LEF1Q9UJU2 399 aaPredicted RBP18.63■□□□□ 0.57
LAMP1-201ENST00000332556 NOBOXO60393 691 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 EEDO75530 441 aaKnown RBP18.62■□□□□ 0.57
LAMP1-201ENST00000332556 LRATO95237 230 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 OPRL1P41146 370 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 PLA2G16P53816 162 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 ARSFP54793 590 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 ZXDCQ2QGD7 858 aaPredicted RBP18.62■□□□□ 0.57
LAMP1-201ENST00000332556 FAM174BQ3ZCQ3 159 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 ATP13A5Q4VNC0 1218 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 PERM1Q5SV97 790 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 VRK3Q8IV63 474 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 C10orf111Q8N326 155 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 TMCO5AQ8N6Q1 288 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 ZNF366Q8N895 744 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 FBXO30Q8TB52 745 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 FIG4Q92562 907 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 MAGEE1Q9HCI5 957 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 ST14Q9Y5Y6 855 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 SEC14L2O76054 403 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 UGT2B4P06133 528 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 IDUAP35475 653 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 HALP42357 657 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 GRSF1Q12849 480 aaKnown RBP eCLIP18.62■□□□□ 0.571e-7■■■■■ 29.9
LAMP1-201ENST00000332556 PRKG2Q13237 762 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 AQP6Q13520 282 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 MEP1AQ16819 746 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 INO80DQ53TQ3 878 aaPredicted RBP18.62■□□□□ 0.57
LAMP1-201ENST00000332556 BROXQ5VW32 411 aa18.62■□□□□ 0.57
LAMP1-201ENST00000332556 ASTLQ6HA08 431 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms