RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 KRT81Q14533 505 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 CDHR3Q6ZTQ4 885 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 RFX8Q6ZV50 586 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 CAMKMTQ7Z624 323 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 MAP7D3Q8IWC1 876 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 RHOT2Q8IXI1 618 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 OR11G2Q8NGC1 345 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 HSPH1Q92598 858 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 GLYATL1Q969I3 302 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 RMND5BQ96G75 393 aaPredicted RBP14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 GPR137Q96N19 417 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 LYSMD1Q96S90 227 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 RBSNQ9H1K0 784 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 MRM3Q9HC36 420 aaKnown RBP14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 SLC24A3Q9HC58 644 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 DHCR7Q9UBM7 475 aaKnown RBP14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 SLC24A2Q9UI40 661 aa14.22□□□□□ -0.13
CTHRC1-201ENST00000330295 GSAPA4D1B5 854 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 GOLGA6L6A8MZA4 724 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 H3BMH7 237 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 ADAM10O14672 748 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 OR2B3O76000 313 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 ZRANB2O95218 330 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 F10P00742 488 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 HLA-DPA1P20036 260 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 SPAM1P38567 509 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 TBX2Q13207 712 aaPredicted RBP14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 SPA17Q15506 151 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 ASTE1Q2TB18 679 aaPredicted RBP14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 KRTCAP3Q53RY4 240 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 ANKRD20A8PQ5CZ79 823 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 C3P1Q6ZMU1 363 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 TRAPPC5Q8IUR0 188 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 PHC2Q8IXK0 858 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 TAB3Q8N5C8 712 aaPredicted RBP14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 ACRBPQ8NEB7 543 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 CCHCR1Q8TD31 782 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 VPS50Q96JG6 964 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 KCTD15Q96SI1 283 aaPredicted RBP14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 CHP1Q99653 195 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 ZSCAN5AQ9BUG6 496 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 SLC22A11Q9NSA0 550 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 TXLNGQ9NUQ3 528 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 STMN3Q9NZ72 180 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 PTGFRNQ9P2B2 879 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 INTUQ9ULD6 942 aa14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 MRPS2Q9Y399 296 aaKnown RBP14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 CFAP20Q9Y6A4 193 aaKnown RBP14.21□□□□□ -0.13
CTHRC1-201ENST00000330295 NKX2-6A6NCS4 301 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 RNF212BA8MTL3 300 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 MATN2O00339 956 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 KCNJ13O60928 360 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 USP1O94782 785 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 PROSCO94903 275 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 CYLC1P35663 651 aaPredicted RBP14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 ARHGAP25P42331 645 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 MMP13P45452 471 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 XRCC4Q13426 336 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 DPYSL2Q16555 572 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 KHDC1Q4VXA5 237 aaKnown RBP14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 ODF2Q5BJF6 829 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 TMCO3Q6UWJ1 677 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 DOLPP1Q86YN1 238 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 FAM20CQ8IXL6 584 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 CCDC170Q8IYT3 715 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 EID3Q8N140 333 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 SUN3Q8TAQ9 357 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 PSMF1Q92530 271 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 N4BP2L2Q92802 583 aaPredicted RBP14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 PEBP4Q96S96 227 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 PITPNM3Q9BZ71 974 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 SPRTNQ9H040 489 aaPredicted RBP14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 KLHL25Q9H0H3 589 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 KIR3DX1Q9H7L2 352 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 SPTLC3Q9NUV7 552 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 NENFQ9UMX5 172 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 CHKBQ9Y259 395 aa14.2□□□□□ -0.14
CTHRC1-201ENST00000330295 CPAMD8Q8IZJ3 1885 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 FAM90A27PA6NNH2 459 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 WIPF1O43516 503 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 TOXO94900 526 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 PRAMEF1O95521 474 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 MLYCDO95822 493 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 RARAP10276 462 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 PVRP15151 417 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 ABOP16442 354 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 PRDX3P30048 256 aaKnown RBP14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 HOXC12P31275 282 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 SERPINB6P35237 376 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 CTSCP53634 463 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 RBBP7Q16576 425 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 CA9Q16790 459 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 ALS2CLQ60I27 953 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 PDPK2PQ6A1A2 396 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 AMZ2Q86W34 360 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 KCTD6Q8NC69 237 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 OR4E2Q8NGC2 313 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 CCDC110Q8TBZ0 833 aa14.19□□□□□ -0.14
CTHRC1-201ENST00000330295 BRIX1Q8TDN6 353 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms