RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SH3GL3Q99963 347 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ACPTQ9BZG2 426 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CEP44Q9C0F1 390 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 ASAH2Q9NR71 780 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 SLCO3A1Q9UIG8 710 aa14.24□□□□□ -0.13
TPM3-206ENST00000330188 CCL16O15467 120 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 TULP3O75386 442 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 PGRP06401 933 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 PFKLP17858 780 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 RPL10P27635 214 aaKnown RBP14.23□□□□□ -0.13
TPM3-206ENST00000330188 DYNC1I2Q13409 638 aaKnown RBP14.23□□□□□ -0.13
TPM3-206ENST00000330188 CPSF6Q16630 551 aaKnown RBP eCLIP14.23□□□□□ -0.135e-7■□□□□ 10.7
TPM3-206ENST00000330188 MAPKAPK3Q16644 382 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 KCTD21Q4G0X4 260 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 ZDHHC20Q5W0Z9 365 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 TTC23LQ6PF05 361 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 Q6ZVU0 165 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 DET1Q7L5Y6 550 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 LRRC70Q7Z2Q7 622 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 MSRB3Q8IXL7 192 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 MPP4Q96JB8 637 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 VPS50Q96JG6 964 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 SLC12A9Q9BXP2 914 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 ACTR8Q9H981 624 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 HCFC1R1Q9NWW0 138 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 C1orf109Q9NX04 203 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 SMPD3Q9NY59 655 aaPredicted RBP14.23□□□□□ -0.13
TPM3-206ENST00000330188 SLC25A37Q9NYZ2 338 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CD84Q9UIB8 345 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CEPT1Q9Y6K0 416 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CROCCQ5TZA2 2017 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 NEDD8-MDP1E9PL57 170 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 H3BSA7 217 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 NUAK1O60285 661 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 ARHGEF15O94989 841 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CXCL14O95715 111 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 PDYNP01213 254 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 KRT6AP02538 564 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 KRT6BP04259 564 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 IL6P05231 212 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 BCKDHAP12694 445 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 RPS9P46781 194 aaKnown RBP14.23□□□□□ -0.13
TPM3-206ENST00000330188 KRT6CP48668 564 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CDH15P55291 814 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CYP4F3Q08477 520 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 HSPA14Q0VDF9 509 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 TBPL2Q6SJ96 375 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 VRK3Q8IV63 474 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 AADATQ8N5Z0 425 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 ZNF548Q8NEK5 533 aaPredicted RBP14.23□□□□□ -0.13
TPM3-206ENST00000330188 ITFG1Q8TB96 612 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CYGBQ8WWM9 190 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 FBXL20Q96IG2 436 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 BDH2Q9BUT1 245 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CRISPLD2Q9H0B8 497 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 IKZF5Q9H5V7 419 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 NTN4Q9HB63 628 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 PARVBQ9HBI1 364 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 CD320Q9NPF0 282 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 SAGE1Q9NXZ1 904 aa14.23□□□□□ -0.13
TPM3-206ENST00000330188 KCNE1BA0A087WTH5 132 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 UPK1AO00322 258 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 AREL1O15033 823 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 CLOCKO15516 846 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 BMP10O95393 424 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 C8GP07360 202 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 LINC00271P0C7V0 271 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 MPC1LP0DKB6 136 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 PABPC1P11940 636 aaKnown RBP14.22□□□□□ -0.13
TPM3-206ENST00000330188 NFKBIAP25963 317 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 CAPGP40121 348 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 SLC44A4Q53GD3 710 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 TTC33Q6PID6 262 aaPredicted RBP14.22□□□□□ -0.13
TPM3-206ENST00000330188 HOMEZQ8IX15 550 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 ZNF786Q8N393 782 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 TCAIMQ8N3R3 496 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 DHRSXQ8N5I4 330 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 OR2T12Q8NG77 320 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 CLHC1Q8NHS4 586 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 MAGEE2Q8TD90 523 aaPredicted RBP14.22□□□□□ -0.13
TPM3-206ENST00000330188 ASB11Q8WXH4 323 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 TMIGD2Q96BF3 282 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 TCEAL4Q96EI5 215 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 EMILIN2Q9BXX0 1053 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 GORASP2Q9H8Y8 452 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.22□□□□□ -0.13
TPM3-206ENST00000330188 FADS3Q9Y5Q0 445 aa14.22□□□□□ -0.13
TPM3-206ENST00000330188 PLXNA2O75051 1894 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 TRIM64CA6NLI5 447 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 PRSS23O95084 383 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 CLIC3O95833 236 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 ADH1AP07327 375 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 RAP2AP10114 183 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 ACRP10323 421 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 ATP1B2P14415 290 aaPredicted RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 CDH2P19022 906 aaPredicted RBP14.21□□□□□ -0.13
TPM3-206ENST00000330188 SLC6A12P48065 614 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 MAP7Q14244 749 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 GGTA1PQ4G0N0 100 aa14.21□□□□□ -0.13
TPM3-206ENST00000330188 FAM98BQ52LJ0 330 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms