RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 ILF3Q12906 894 aaKnown RBP eCLIP2.54□□□□□ -2
RGPD6-201ENST00000329516 CRYMQ14894 314 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 DLG2Q15700 870 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 SGCBQ16585 318 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 SLC45A4Q5BKX6 768 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 AFTPHQ6ULP2 937 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ARHGAP36Q6ZRI8 547 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 STRA8Q7Z7C7 330 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 DCUN1D3Q8IWE4 304 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ZC3H7AQ8IWR0 971 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 LRRC47Q8N1G4 583 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 TTC29Q8NA56 475 aaPredicted RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 FAM47BQ8NA70 645 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 PCSK9Q8NBP7 692 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 TMEM143Q96AN5 459 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 POLR3FQ9H1D9 316 aaPredicted RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 LRMDAQ9H2I8 198 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 CUEDC2Q9H467 287 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 MRPL47Q9HD33 250 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 ACOXLQ9NUZ1 547 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 PRMT7Q9NVM4 692 aaPredicted RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 HIF1ANQ9NWT6 349 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 GPRC5DQ9NZD1 345 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ZMYM5Q9UJ78 669 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 CORO2BQ9UQ03 480 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 SNX5Q9Y5X3 404 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 LRRK2Q5S007 2527 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 SPG11Q96JI7 2443 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 A0A087WZ62 844 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 KCNJ18B7U540 433 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 IL18BPO95998 194 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 UGT2B4P06133 528 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 CD72P21854 359 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 F8A1P23610 371 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ELK3P41970 407 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 MAGEB1P43366 347 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 BRCC3P46736 316 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 TRPC1P48995 793 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 TMED10P49755 219 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 YWHAEP62258 255 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 B4GALNT1Q00973 533 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 GRIK2Q13002 908 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 BIRC2Q13490 618 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 KCNJ12Q14500 433 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ACOX1Q15067 660 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 TMEM67Q5HYA8 995 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 EFHC1Q5JVL4 640 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 FRMD7Q6ZUT3 714 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 HS2ST1Q7LGA3 356 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 EFL1Q7Z2Z2 1120 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 LONP2Q86WA8 852 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ANKRD52Q8NB46 1076 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 COLGALT1Q8NBJ5 622 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 RDM1Q8NG50 284 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 TCP11Q8WWU5 503 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 EXT2Q93063 718 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 LENG1Q96BZ8 264 aaPredicted RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 CSRNP1Q96S65 589 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 KCTD15Q96SI1 283 aaPredicted RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 FANCEQ9HB96 536 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 CSNK1G1Q9HCP0 422 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 TREX1Q9NSU2 369 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 NINJ2Q9NZG7 142 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 RCC2Q9P258 522 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 ZNF70Q9UC06 446 aaPredicted RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 EIF2B4Q9UI10 523 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 SF3B6Q9Y3B4 125 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 C2CD2Q9Y426 696 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 PLEKHM1Q9Y4G2 1056 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 A8MX80 341 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 KLF11O14901 512 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 AKAP10O43572 662 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 SSNA1O43805 119 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 CCNT2O60583 730 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 SC5DO75845 299 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 SUPT20HL2P0C7V6 817 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ATF1P18846 271 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 PTPN3P26045 913 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 PTPN4P29074 926 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 RECQLP46063 649 aaPredicted RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 PTDSS1P48651 473 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 NAGLUP54802 743 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 HUNKP57058 714 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 TNNC1P63316 161 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 RPP38P78345 283 aaKnown RBP2.54□□□□□ -2
RGPD6-201ENST00000329516 MAPRE2Q15555 327 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 SMU1Q2TAY7 513 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 EML3Q32P44 896 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ATP13A5Q4VNC0 1218 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ESCO2Q56NI9 601 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ARHGEF16Q5VV41 709 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 JADE1Q6IE81 842 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 CDPF1Q6NVV7 123 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ADGRD1Q6QNK2 874 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 CATSPERGQ6ZRH7 1159 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 ESPNLQ6ZVH7 1005 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 KCTD20Q7Z5Y7 419 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 GALNT5Q7Z7M9 940 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 FAM217AQ8IXS0 508 aa2.54□□□□□ -2
RGPD6-201ENST00000329516 LRRC71Q8N4P6 559 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms