RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 IFT88Q13099 833 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 CGB2Q6NT52 195 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 DOK6Q6PKX4 331 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 ISCA2Q86U28 154 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 NRROSQ86YC3 692 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 COX14Q96I36 57 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 VPS35Q96QK1 796 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 EML4Q9HC35 981 aaKnown RBP16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 MOSPD1Q9UJG1 213 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 HAO1Q9UJM8 370 aa16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 APOBEC2Q9Y235 224 aaKnown RBP16.1■□□□□ 0.17
PDLIM1-201ENST00000329399 FAM149AA5PLN7 773 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 H3BM21 787 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 TK2O00142 265 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 TNFRSF10CO14798 259 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 TNFP01375 233 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 SBK3P0C264 359 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 OR56A5P0C7T3 313 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 TFEBP19484 476 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 TEAD1P28347 426 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 CDKN1CP49918 316 aaPredicted RBP16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 HNRNPH2P55795 449 aaKnown RBP16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 PRKAA1Q13131 559 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 RCN2Q14257 317 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 ZNF460Q14592 562 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 INAVAQ3KP66 663 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 CTSL3PQ5NE16 218 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 LDLRAP1Q5SW96 308 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 SLC35F3Q8IY50 421 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 BTN2A2Q8WVV5 523 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 C10orf82Q8WW14 230 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 GPR21Q99679 349 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 TUBB6Q9BUF5 446 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 ILKAPQ9H0C8 392 aaPredicted RBP16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 WWP1Q9H0M0 922 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 PHPT1Q9NRX4 125 aaPredicted RBP16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 SPATS2LQ9NUQ6 558 aaKnown RBP16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 CPSF2Q9P2I0 782 aaKnown RBP16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 VTI1BQ9UEU0 232 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 ANGPTL2Q9UKU9 493 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 SUFUQ9UMX1 484 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 SLC17A4Q9Y2C5 497 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 PRKAB1Q9Y478 270 aa16.09■□□□□ 0.17
PDLIM1-201ENST00000329399 USP24Q9UPU5 2620 aa16.08■□□□□ 0.17
PDLIM1-201ENST00000329399 PTPRBP23467 1997 aa16.08■□□□□ 0.17
PDLIM1-201ENST00000329399 NEMP2A6NFY4 417 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 GPR39O43194 453 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 DLX3O60479 287 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 KERAO60938 352 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 HSPA4LO95757 839 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 F7P08709 466 aaPredicted RBP16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 CKMT1AP12532 417 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 ENO3P13929 434 aaPredicted RBP16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 AK4P27144 223 aaPredicted RBP16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 GLRBP48167 497 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 CLCN7P51798 805 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 KHDC1Q4VXA5 237 aaKnown RBP16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 CFAP157Q5JU67 520 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 PAQR3Q6TCH7 311 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 TMEM207Q6UWW9 146 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 AFAP1L2Q8N4X5 818 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 FAM181AQ8N9Y4 354 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 ANKRD49Q8WVL7 239 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 L3HYPDHQ96EM0 354 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 DCUN1D1Q96GG9 259 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 SCARF2Q96GP6 870 aaPredicted RBP16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 HIC2Q96JB3 615 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 FAR2Q96K12 515 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 BOCQ9BWV1 1114 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 SPATA16Q9BXB7 569 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 CARS2Q9HA77 564 aaKnown RBP16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 NPHS2Q9NP85 383 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 MED16Q9Y2X0 877 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 RAP2CQ9Y3L5 183 aa16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 DSPP15924 2871 aaKnown RBP16.08■□□□□ 0.16
PDLIM1-201ENST00000329399 OR1I1O60431 355 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 ATP5HO75947 161 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 GSTM1P09488 218 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 PRSS56P0CW18 603 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 CTSEP14091 401 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 ALOX15P16050 662 aaPredicted RBP16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 IMPDH1P20839 514 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 ACP1P24666 158 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 GNPDA1P46926 289 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 GSTM4Q03013 218 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 LACTB2Q53H82 288 aaPredicted RBP16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 GUSBP11Q6P575 273 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 FOXR1Q6PIV2 292 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 ADAMTSL2Q86TH1 951 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 CD200R1Q8TD46 325 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 CCT6BQ92526 530 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 LRRC37BQ96QE4 947 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 GATA5Q9BWX5 397 aaPredicted RBP16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 TMEM121BQ9BXQ6 578 aaPredicted RBP16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 ACTR5Q9H9F9 607 aaPredicted RBP16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 MRGBPQ9NV56 204 aa16.07■□□□□ 0.16
PDLIM1-201ENST00000329399 DNAJC6O75061 913 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 ANXA6P08133 673 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 UGT1A6P19224 532 aa16.06■□□□□ 0.16
PDLIM1-201ENST00000329399 UGT1A1P22309 533 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms