RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 PTCHD3Q3KNS1 767 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 SYTL3Q4VX76 610 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 TSTD2Q5T7W7 516 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 LYPLAL1Q5VWZ2 237 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-201ENST00000327154 SYTL1Q8IYJ3 562 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 TBC1D21Q8IYX1 336 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 OR6P1Q8NGX9 317 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.66□□□□□ -0.224e-10■■■■■ 86.3
RPAIN-201ENST00000327154 OR2A14Q96R47 310 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 TTC1Q99614 292 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 SLC25A23Q9BV35 468 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 FRMD8P1Q9BZ68 369 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-201ENST00000327154 FAM60AQ9NP50 221 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 ACSS2Q9NR19 701 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 RAB6BQ9NRW1 208 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 SPHK1Q9NYA1 384 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 POLG2Q9UHN1 485 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 TCFL5Q9UL49 500 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 SNX7Q9UNH6 387 aa13.66□□□□□ -0.22
RPAIN-201ENST00000327154 HECTD1Q9ULT8 2610 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 E7EQ34 232 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 ZSCAN5DPP0CG00 497 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 PTGIRP43119 386 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 PLOD1Q02809 727 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-201ENST00000327154 ZIC1Q15915 447 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 AFTPHQ6ULP2 937 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 ZNF662Q6ZS27 426 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 GPR135Q8IZ08 494 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 GLIS1Q8NBF1 620 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 OR4L1Q8NH43 312 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 OR5K2Q8NHB8 316 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 ADAMTS17Q8TE56 1095 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 N4BP2L2Q92802 583 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-201ENST00000327154 TCTN2Q96GX1 697 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 RANBP9Q96S59 729 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 CASS4Q9NQ75 786 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 OR6C2Q9NZP2 312 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 RIMKLBQ9ULI2 386 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 PLAGL1Q9UM63 463 aa13.65□□□□□ -0.22
RPAIN-201ENST00000327154 HCRTR1O43613 425 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 APRTP07741 180 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 AGXTP21549 392 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 CCR7P32248 378 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 PGDP52209 483 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 PRAMEP78395 509 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 ACVR1Q04771 509 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 UBAP2LQ14157 1087 aaKnown RBP13.64□□□□□ -0.23
RPAIN-201ENST00000327154 SEMA3AQ14563 771 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 FASTKD1Q53R41 847 aaKnown RBP13.64□□□□□ -0.23
RPAIN-201ENST00000327154 FAM198BQ6UWH4 519 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 ZNF534Q76KX8 674 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 CCDC89Q8N998 374 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 C19orf47Q8N9M1 422 aaKnown RBP13.64□□□□□ -0.23
RPAIN-201ENST00000327154 FLVCR1-AS1Q8TAF5 88 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 MIB2Q96AX9 1013 aa13.64□□□□□ -0.23
RPAIN-201ENST00000327154 SPRTNQ9H040 489 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-201ENST00000327154 A6NL46 340 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 IQCF5A8MTL0 148 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 ISM1B1AKI9 464 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 F8W8V4 182 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 OR2B3O76000 313 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 TMEM63AO94886 807 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 CTSBP07858 339 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 HBQ1P09105 142 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 RPL22P35268 128 aaKnown RBP13.63□□□□□ -0.23
RPAIN-201ENST00000327154 GABRA4P48169 554 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 HSPA14Q0VDF9 509 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 NCF4Q15080 339 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 RPS6KA1Q15418 735 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 DEFB110Q30KQ9 67 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 MEI1Q5TIA1 1274 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 C1orf189Q5VU69 101 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 MLIPQ5VWP3 458 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 NLRP9Q7RTR0 991 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 LDB1Q86U70 411 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-201ENST00000327154 VRK3Q8IV63 474 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 ZBTB2Q8N680 514 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 TRIM58Q8NG06 486 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 CFAP61Q8NHU2 1237 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 UBE2Q2Q8WVN8 375 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 SGSM3Q96HU1 749 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 DPH2Q9BQC3 489 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-201ENST00000327154 AP1M1Q9BXS5 423 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 MLXIPLQ9NP71 852 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 CHRAC1Q9NRG0 131 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 PAK5Q9P286 719 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 TCAF1Q9Y4C2 921 aa13.63□□□□□ -0.23
RPAIN-201ENST00000327154 PCDHGA9Q9Y5G4 932 aaKnown RBP13.63□□□□□ -0.23
RPAIN-201ENST00000327154 A0A0J9YY10 115 aa13.62□□□□□ -0.23
RPAIN-201ENST00000327154 TTLL8A6PVC2 850 aa13.62□□□□□ -0.23
RPAIN-201ENST00000327154 C9J4A7 227 aa13.62□□□□□ -0.23
RPAIN-201ENST00000327154 H3BMH7 237 aa13.62□□□□□ -0.23
RPAIN-201ENST00000327154 ZNF185O15231 689 aa13.62□□□□□ -0.23
RPAIN-201ENST00000327154 KDM1AO60341 852 aa13.62□□□□□ -0.23
RPAIN-201ENST00000327154 CBSLP0DN79 551 aa13.62□□□□□ -0.23
RPAIN-201ENST00000327154 PEBP1P30086 187 aaKnown RBP13.62□□□□□ -0.23
RPAIN-201ENST00000327154 CBSP35520 551 aa13.62□□□□□ -0.23
RPAIN-201ENST00000327154 PPARGP37231 505 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms