RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 CAP1Q01518 475 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 ZNF460Q14592 562 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 CNTN3Q9P232 1028 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 PADI3Q9ULW8 664 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 PREX1Q8TCU6 1659 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 MT-CYBP00156 380 aaPredicted RBP20.67■□□□□ 0.9
RNF40-201ENST00000324685 IL7RP16871 459 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 SLC6A4P31645 630 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 CEBPGP53567 150 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 DGKZQ13574 1117 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 SMARCD3Q6STE5 483 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 CLIP4Q8N3C7 705 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 HIST1H2AAQ96QV6 131 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 SLC22A4Q9H015 551 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 TLE6Q9H808 572 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 DUS2Q9NX74 493 aaKnown RBP20.67■□□□□ 0.9
RNF40-201ENST00000324685 DNM1LO00429 736 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 PGLSO95336 258 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 TXNL4AP83876 142 aaKnown RBP20.67■□□□□ 0.9
RNF40-201ENST00000324685 SCARB2Q14108 478 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 OGFOD2Q6N063 350 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 SETD6Q8TBK2 473 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 C14orf105Q9NVL8 296 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 PCDHAC2Q9Y5I4 1007 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 LRRC72A6NJI9 287 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 FOXO6A8MYZ6 492 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 PI15O43692 258 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 CPN2P22792 545 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 MTPNP58546 118 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 ZNF234Q14588 700 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 CYP1B1Q16678 543 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 NATD1Q8N6N6 113 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 ZCCHC10Q8TBK6 192 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 SMG7Q92540 1137 aaKnown RBP20.67■□□□□ 0.9
RNF40-201ENST00000324685 FAM129BQ96TA1 746 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 SPATA9Q9BWV2 254 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 OR51V1Q9H2C8 321 aa20.67■□□□□ 0.9
RNF40-201ENST00000324685 MKKSQ9NPJ1 570 aaPredicted RBP20.67■□□□□ 0.9
RNF40-201ENST00000324685 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.66■□□□□ 0.9
RNF40-201ENST00000324685 PPP1R11O60927 126 aaPredicted RBP20.66■□□□□ 0.9
RNF40-201ENST00000324685 SRPRAP08240 638 aaKnown RBP20.66■□□□□ 0.9
RNF40-201ENST00000324685 ACSL1P33121 698 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 HERVK_113P63132 956 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 RPP38P78345 283 aaKnown RBP20.66■□□□□ 0.9
RNF40-201ENST00000324685 ERVK-6Q9BXR3 956 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 ADGRB2O60241 1585 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 K7EPI3 171 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 RYKP34925 604 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 UGT1A3P35503 534 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 MC1RQ01726 317 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 MINDY4Q4G0A6 757 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 ARMC10Q8N2F6 343 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 GALNT15Q8N3T1 639 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 PACRGLQ8N7B6 248 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 TTLQ8NG68 377 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 YTHDF1Q9BYJ9 559 aaKnown RBP20.66■□□□□ 0.9
RNF40-201ENST00000324685 MAGEE1Q9HCI5 957 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 PRH1P02810 166 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 MERTKQ12866 999 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 ZMYND11Q15326 602 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 TIGD6Q17RP2 521 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 PSMG2Q969U7 264 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 CNDP2Q96KP4 475 aaKnown RBP20.66■□□□□ 0.9
RNF40-201ENST00000324685 SLC4A9Q96Q91 983 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 GAL3ST4Q96RP7 486 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 TRBV23OR9-2A0A075B6M9 112 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 GBX2P52951 348 aaPredicted RBP20.66■□□□□ 0.9
RNF40-201ENST00000324685 CASP9P55211 416 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 FUT10Q6P4F1 479 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 CCDC107Q8WV48 283 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 PTPN18Q99952 460 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 SLC39A3Q9BRY0 314 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 GRHL1Q9NZI5 618 aa20.66■□□□□ 0.9
RNF40-201ENST00000324685 CHRNB2P17787 502 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 EIF2S3P41091 472 aaKnown RBP20.65■□□□□ 0.9
RNF40-201ENST00000324685 CLCN7P51798 805 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 CAND1Q86VP6 1230 aaKnown RBP20.65■□□□□ 0.9
RNF40-201ENST00000324685 KLRG1Q96E93 195 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 PCDHGB1Q9Y5G3 927 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 MST1RQ04912 1400 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 IMPDH1P20839 514 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 DAG1Q14118 895 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 PLEKHG6Q3KR16 790 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 AMIGO1Q86WK6 493 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 SRMSQ9H3Y6 488 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 TPST2O60704 377 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 MADCAM1Q13477 382 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 FAM110CQ1W6H9 321 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 SLC51AQ86UW1 340 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 C10orf82Q8WW14 230 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 POLR2J3Q9H1A7 115 aaKnown RBP20.65■□□□□ 0.9
RNF40-201ENST00000324685 ELOVL2Q9NXB9 296 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 ITGA10O75578 1167 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 MYCLP1P12525 358 aaPredicted RBP20.65■□□□□ 0.9
RNF40-201ENST00000324685 ATP5A1P25705 553 aaKnown RBP20.65■□□□□ 0.9
RNF40-201ENST00000324685 OR2B6P58173 313 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 DCDC1P59894 354 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 RPL26P61254 145 aaKnown RBP20.65■□□□□ 0.9
RNF40-201ENST00000324685 MSANTD1Q6ZTZ1 278 aa20.65■□□□□ 0.9
RNF40-201ENST00000324685 FAM156AQ8NDB6 213 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms