RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CHIAQ9BZP6 476 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 COMMD3Q9UBI1 195 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 BCL9LQ86UU0 1499 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 PLXNB3Q9ULL4 1909 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 C1orf196B1AJZ1 125 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 H3BM21 787 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 SLC28A2O43868 658 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 TRBC1P01850 177 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 EPORP19235 508 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 GNPDA1P46926 289 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 BAATQ14032 418 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 GPAT3Q53EU6 434 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 GCNT6Q5T4J0 391 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 KLHL24Q6TFL4 600 aa6.94□□□□□ -1.3
SMC1A-201ENST00000322213 RPRD1AQ96P16 312 aaPredicted RBP6.94□□□□□ -1.3
SMC1A-201ENST00000322213 ANAPC1Q9H1A4 1944 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ENTPD6O75354 484 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 EEDO75530 441 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 GLUD2P49448 558 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 GDF10P55107 478 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 MTPNP58546 118 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 GTF2H2Q13888 395 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 AP5B1Q2VPB7 878 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 GTF2H2CQ6P1K8 395 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TOMM5Q8N4H5 51 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 OR4L1Q8NH43 312 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SLC2A14Q8TDB8 520 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SMG7Q92540 1137 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 P2RY11Q96G91 374 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZDHHC15Q96MV8 337 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 KCNC2Q96PR1 638 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 HSD17B14Q9BPX1 270 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TKTL2Q9H0I9 626 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SAV1Q9H4B6 383 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 C12orf10Q9HB07 376 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SLC1A7O00341 560 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PIP5K1BO14986 540 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PSMD10O75832 226 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PRKCHP24723 683 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 EIF5AP63241 154 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF177Q13360 481 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 GALEQ14376 348 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TFAP2CQ92754 450 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 LGALS12Q96DT0 336 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 METTL2AQ96IZ6 378 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF512Q96ME7 567 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TCF25Q9BQ70 676 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TDRD3Q9H7E2 651 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZDHHC2Q9UIJ5 367 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 POLHQ9Y253 713 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF106Q9H2Y7 1883 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 A0A1B0GVI7 797 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 MEIS2O14770 477 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PLATP00750 562 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ARF5P84085 180 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 KLF1Q13351 362 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PCBP1Q15365 356 aaKnown RBP eCLIP6.93□□□□□ -1.39e-13■□□□□ 10.9
SMC1A-201ENST00000322213 TRMT10BQ6PF06 316 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 VASH1Q7L8A9 365 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 NDNFQ8TB73 568 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF350Q9GZX5 532 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ANKDD1BA6NHY2 528 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 SLC19A2O60779 497 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 IFNW1P05000 195 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TGFB3P10600 412 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PVALBP20472 110 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 RBM34P42696 430 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 CCR10P46092 362 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ARFIP1P53367 373 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 CORO6Q6QEF8 472 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 LINGO2Q7L985 606 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PRSS48Q7RTY5 328 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 OXR1Q8N573 874 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF675Q8TD23 568 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 KLHL6Q8WZ60 621 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 RFT1Q96AA3 541 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ARL5BQ96KC2 179 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 CSPG4P5Q96PW8 444 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 POLR2J2Q9GZM3 115 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TBC1D17Q9HA65 648 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 NDUFAF4Q9P032 175 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 FBXO5Q9UKT4 447 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZNF490Q9ULM2 529 aaPredicted RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ALG5Q9Y673 324 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 C2orf74A8MZ97 194 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ENTPD3O75355 529 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 RPS6KA4O75676 772 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 RNASEH2AO75792 299 aaKnown RBP6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PET100P0DJ07 73 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PTPN2P17706 415 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 TYMPP19971 482 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ACOX1Q15067 660 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 VN1R5Q7Z5H4 357 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 PLCZ1Q86YW0 608 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 DAW1Q8N136 415 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 OR52J3Q8NH60 311 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 COQ8AQ8NI60 647 aa6.93□□□□□ -1.3
SMC1A-201ENST00000322213 ZSWIM3Q96MP5 696 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms