RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 AGO1Q9UL18 857 aaKnown RBP18.71■□□□□ 0.59
RTN4-201ENST00000317610 ERVW-1Q9UQF0 538 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 PCDHB1Q9Y5F3 818 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 PCDHGA10Q9Y5H3 936 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 PRMT5O14744 637 aaPredicted RBP18.71■□□□□ 0.58
RTN4-201ENST00000317610 DUSP11O75319 330 aaKnown RBP18.71■□□□□ 0.58
RTN4-201ENST00000317610 SERPINA1P01009 418 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 THPOP40225 353 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 EIF2B2P49770 351 aaKnown RBP18.71■□□□□ 0.58
RTN4-201ENST00000317610 HUNKP57058 714 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 SLC35A2P78381 396 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 GTDC1Q4AE62 458 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 PERM1Q5SV97 790 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 LRIF1Q5T3J3 769 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 CACHD1Q5VU97 1274 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 CAPN13Q6MZZ7 669 aaPredicted RBP18.71■□□□□ 0.58
RTN4-201ENST00000317610 B3GNT8Q7Z7M8 397 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 ZNF280BQ86YH2 543 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 OR6Q1Q8NGQ2 317 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 NDNFQ8TB73 568 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 NETO1Q8TDF5 533 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 NCLNQ969V3 563 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 PYURFQ96I23 114 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 BTBD2Q9BX70 525 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 NSUN3Q9H649 340 aaKnown RBP18.71■□□□□ 0.58
RTN4-201ENST00000317610 ZNF408Q9H9D4 720 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 ERVK-18Q9QC07 812 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 PMF1-BGLAPU3KQ54 211 aa18.71■□□□□ 0.58
RTN4-201ENST00000317610 PLXNA4Q9HCM2 1894 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 AKR1A1P14550 325 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 FUT4P22083 530 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 GNPDA1P46926 289 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 HSPA7P48741 367 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 KCNQ1P51787 676 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 CDH4P55283 916 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 IL5RAQ01344 420 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 VAC14Q08AM6 782 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 KEAP1Q14145 624 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 GNASQ5JWF2 1037 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 CPZQ66K79 652 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 DNAJC14Q6Y2X3 702 aaPredicted RBP18.7■□□□□ 0.58
RTN4-201ENST00000317610 PHACTR4Q8IZ21 702 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 CADM3Q8N126 398 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 DYNC2LI1Q8TCX1 351 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 SPON2Q9BUD6 331 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 ADGRE3Q9BY15 652 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 C1orf109Q9NX04 203 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 VNN3Q9NY84 501 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 MAN2B2Q9Y2E5 1009 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 TPRKBQ9Y3C4 175 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 OARD1Q9Y530 152 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 PCDHGC4Q9Y5F7 938 aa18.7■□□□□ 0.58
RTN4-201ENST00000317610 VWA8A3KMH1 1905 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 M0R3G1 203 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 TOR1BO14657 336 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 AREL1O15033 823 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 ERN1O75460 977 aaKnown RBP18.69■□□□□ 0.58
RTN4-201ENST00000317610 ZDHHC11BP0C7U3 371 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 BMP4P12644 408 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 HOXB9P17482 250 aaPredicted RBP18.69■□□□□ 0.58
RTN4-201ENST00000317610 IGFBP5P24593 272 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 GRK3P35626 688 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 SERPINB10P48595 397 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 VARS2Q5ST30 1063 aaKnown RBP18.69■□□□□ 0.58
RTN4-201ENST00000317610 SUSD1Q6UWL2 747 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 GCNT7Q6ZNI0 430 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 TAS2R42Q7RTR8 314 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 KRTCAP2Q8N6L1 136 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 EFHBQ8N7U6 833 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 TNKS2Q9H2K2 1166 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 CCSER2Q9H7U1 834 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 SLC6A13Q9NSD5 602 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 ZFP37Q9Y6Q3 630 aaPredicted RBP18.69■□□□□ 0.58
RTN4-201ENST00000317610 GOLGA8CPA6NN73 597 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 ACSL4O60488 711 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 NADKO95544 446 aaPredicted RBP18.69■□□□□ 0.58
RTN4-201ENST00000317610 TMED10P49755 219 aaKnown RBP18.69■□□□□ 0.58
RTN4-201ENST00000317610 CACNG1Q06432 222 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 NPTX1Q15818 432 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 USP39Q53GS9 565 aaKnown RBP18.69■□□□□ 0.58
RTN4-201ENST00000317610 LRRC8DQ7L1W4 858 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 PRSS48Q7RTY5 328 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 CYP4Z1Q86W10 505 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 OR52E6Q96RD3 313 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 KCNH6Q9H252 994 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 LRTM1Q9HBL6 345 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 TRPS1Q9UHF7 1281 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 FAM32AQ9Y421 112 aaKnown RBP18.69■□□□□ 0.58
RTN4-201ENST00000317610 PCDHB14Q9Y5E9 798 aa18.69■□□□□ 0.58
RTN4-201ENST00000317610 A0A096LPI6 279 aa18.68■□□□□ 0.58
RTN4-201ENST00000317610 MRPS14O60783 128 aaKnown RBP18.68■□□□□ 0.58
RTN4-201ENST00000317610 MITFO75030 526 aaPredicted RBP18.68■□□□□ 0.58
RTN4-201ENST00000317610 FTH1P02794 183 aa18.68■□□□□ 0.58
RTN4-201ENST00000317610 FSHRP23945 695 aa18.68■□□□□ 0.58
RTN4-201ENST00000317610 HMGCS1Q01581 520 aa18.68■□□□□ 0.58
RTN4-201ENST00000317610 INAQ16352 499 aa18.68■□□□□ 0.58
RTN4-201ENST00000317610 HIST2H2ACQ16777 129 aaPredicted RBP18.68■□□□□ 0.58
RTN4-201ENST00000317610 P2RY8Q86VZ1 359 aa18.68■□□□□ 0.58
RTN4-201ENST00000317610 C10orf111Q8N326 155 aa18.68■□□□□ 0.58
RTN4-201ENST00000317610 UBTD2Q8WUN7 234 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms