RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ZNF534Q76KX8 674 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 GLIS1Q8NBF1 620 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 OR1L3Q8NH93 324 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 CARD6Q9BX69 1037 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 TRIM4Q9C037 500 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 ACTR5Q9H9F9 607 aaPredicted RBP17.19■□□□□ 0.34
TPM1-203ENST00000317516 CATSPERZQ9NTU4 200 aa17.19■□□□□ 0.34
TPM1-203ENST00000317516 PYCARD-AS1I3L0S3 204 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 PRMT5O14744 637 aaPredicted RBP17.18■□□□□ 0.34
TPM1-203ENST00000317516 CHRM5P08912 532 aaPredicted RBP17.18■□□□□ 0.34
TPM1-203ENST00000317516 RAB40ALP0C0E4 278 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 CCR7P32248 378 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 PMS2P54278 862 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 SARNPP82979 210 aaKnown RBP17.18■□□□□ 0.34
TPM1-203ENST00000317516 TMED2Q15363 201 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 TCTN3Q6NUS6 607 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 NAPRTQ6XQN6 538 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 APLFQ8IW19 511 aaPredicted RBP17.18■□□□□ 0.34
TPM1-203ENST00000317516 DSELQ8IZU8 1212 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 SLC38A9Q8NBW4 561 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 GSDMBQ8TAX9 411 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 PANX3Q96QZ0 392 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 DPH2Q9BQC3 489 aaPredicted RBP17.18■□□□□ 0.34
TPM1-203ENST00000317516 NLNQ9BYT8 704 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 KLHL25Q9H0H3 589 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 CHST8Q9H2A9 424 aa17.18■□□□□ 0.34
TPM1-203ENST00000317516 ISM1B1AKI9 464 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 KPNA5O15131 536 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 PFDN6O15212 129 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 CD3EAPO15446 510 aaKnown RBP17.17■□□□□ 0.34
TPM1-203ENST00000317516 PVRP15151 417 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 UGT2B7P16662 529 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 AGXTP21549 392 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 CASRP41180 1078 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 CSE1LP55060 971 aaKnown RBP17.17■□□□□ 0.34
TPM1-203ENST00000317516 TLE1Q04724 770 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 ABRQ12979 859 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 KIR2DS3Q14952 304 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 PRAMEF17Q5VTA0 474 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 PTRHD1Q6GMV3 140 aaKnown RBP17.17■□□□□ 0.34
TPM1-203ENST00000317516 TTC23LQ6PF05 361 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 CDHR3Q6ZTQ4 885 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 TMEM135Q86UB9 458 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 LRRC6Q86X45 466 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 SLC22A15Q8IZD6 547 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 MPP5Q8N3R9 675 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 C19orf47Q8N9M1 422 aaKnown RBP17.17■□□□□ 0.34
TPM1-203ENST00000317516 OR2A14Q96R47 310 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 NRTNQ99748 197 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 C17orf62Q9BQA9 187 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 AP1M1Q9BXS5 423 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 CHRNA10Q9GZZ6 450 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 SNX7Q9UNH6 387 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 AP1M2Q9Y6Q5 423 aa17.17■□□□□ 0.34
TPM1-203ENST00000317516 A0A0J9YY10 115 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 GPC4O75487 556 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 NDUFS3O75489 264 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 RORAP35398 523 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 KCNJ1P48048 391 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 RPS18P62269 152 aaKnown RBP17.16■□□□□ 0.34
TPM1-203ENST00000317516 KLRB1Q12918 225 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 SDCCAG8Q86SQ7 713 aaPredicted RBP17.16■□□□□ 0.34
TPM1-203ENST00000317516 TEX19Q8NA77 164 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 SLC22A18Q96BI1 424 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 RUFY1Q96T51 708 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 PCMTD2Q9NV79 361 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 GNPTGQ9UJJ9 305 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 TLK1Q9UKI8 766 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 TP53TG5Q9Y2B4 290 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 MRFAP1Q9Y605 127 aa17.16■□□□□ 0.34
TPM1-203ENST00000317516 FLNBO75369 2602 aaKnown RBP17.16■□□□□ 0.34
TPM1-203ENST00000317516 C9J4A7 227 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 ZNF749O43361 778 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 OR2B3O76000 313 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 SLCO2B1O94956 709 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 CXCR5P32302 372 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 RAB28P51157 221 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 SEMA3AQ14563 771 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 SLC5A12Q1EHB4 618 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 ZNF789Q5FWF6 425 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 ARMC3Q5W041 872 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 MRNIPQ6NTE8 343 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 LRRC8BQ6P9F7 803 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 UNC5DQ6UXZ4 953 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 ASB18Q6ZVZ8 466 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 SYTL1Q8IYJ3 562 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 ENDOVQ8N8Q3 282 aaKnown RBP17.15■□□□□ 0.34
TPM1-203ENST00000317516 CFAP61Q8NHU2 1237 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 MRM3Q9HC36 420 aaKnown RBP17.15■□□□□ 0.34
TPM1-203ENST00000317516 ACSS2Q9NR19 701 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 TREX1Q9NSU2 369 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 SPHK1Q9NYA1 384 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 TCFL5Q9UL49 500 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 PPP2R2CQ9Y2T4 447 aa17.15■□□□□ 0.34
TPM1-203ENST00000317516 BOD1L1Q8NFC6 3051 aa17.14■□□□□ 0.33
TPM1-203ENST00000317516 IQCF5A8MTL0 148 aa17.14■□□□□ 0.33
TPM1-203ENST00000317516 CD63P08962 238 aa17.14■□□□□ 0.33
TPM1-203ENST00000317516 TPBGLP0DKB5 382 aa17.14■□□□□ 0.33
TPM1-203ENST00000317516 TPSB2P20231 275 aa17.14■□□□□ 0.33
TPM1-203ENST00000317516 AOAHP28039 575 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms