RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 MANEALQ5VSG8 457 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 OSTM1Q86WC4 334 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 VPS37AQ8NEZ2 397 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SLC7A6Q92536 515 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 FUBP1Q96AE4 644 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ULK4Q96C45 1275 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ZFYVE19Q96K21 471 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IL1RAPQ9NPH3 570 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 GINS2Q9Y248 185 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 LTBP1Q14766 1721 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 B8ZZF3 427 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 I6L893 689 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ANKRD28O15084 1053 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PAGE1O75459 146 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ARIH2O95376 493 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 BMPR1AP36894 532 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MLLT3P42568 568 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CDC42P60953 191 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IL1RL1Q01638 556 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 DUSP7Q16829 419 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PTPRNQ16849 979 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SYT16Q17RD7 645 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 LRRC26Q2I0M4 334 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 WSCD1Q658N2 575 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PAQR3Q6TCH7 311 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TMEM207Q6UWW9 146 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ZSWIM9Q86XI8 627 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IQCF2Q8IXL9 164 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CLIP4Q8N3C7 705 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 FRS2Q8WU20 508 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CDKN2AIPNLQ96HQ2 116 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SENP8Q96LD8 212 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ACOX2Q99424 681 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 AGO3Q9H9G7 860 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 AASDHPPTQ9NRN7 309 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MRPL39Q9NYK5 338 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SLAMF8Q9P0V8 285 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 UXTQ9UBK9 157 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PKP3Q9Y446 797 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TRBV5-3A0A0A0MS03 114 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 UBA6A0AVT1 1052 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 LDB2O43679 373 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 HMBSP08397 361 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CD6P30203 668 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CD86P42081 329 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ZFP36L2P47974 494 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 GMPSP49915 693 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ARSDP51689 593 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PIGFQ07326 219 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CATSPEREQ5SY80 951 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ZCCHC8Q6NZY4 707 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TMPRSS11AQ6ZMR5 421 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 DSG4Q86SJ6 1040 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ABI1Q8IZP0 508 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PPTC7Q8NI37 304 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ARRDC2Q8TBH0 407 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 EMID1Q96A84 441 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 RPL10LQ96L21 214 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 NSUN5Q96P11 429 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 KCNA7Q96RP8 456 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TRIB3Q96RU7 358 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TTLL2Q9BWV7 592 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 RUBCNLQ9H714 662 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ZFP14Q9HCL3 533 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 GIMAP4Q9NUV9 329 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 IL37Q9NZH6 218 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PDP1Q9P0J1 537 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 UBA2Q9UBT2 640 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 MYO1GB0I1T2 1018 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 KCNK2O95069 426 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 EPN2O95208 641 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 GOT2P00505 430 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 USP17L7P0C7H9 530 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ALDH4A1P30038 563 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 HOXA11P31270 313 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 SOX11P35716 441 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 GGT5P36269 586 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PTGER3P43115 390 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 P2RX3P56373 397 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 GRIK4Q16099 956 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 NFE2Q16621 373 aaPredicted RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 FAM174BQ3ZCQ3 159 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PARP15Q460N3 678 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CES5AQ6NT32 575 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ENPP6Q6UWR7 440 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 GCNT7Q6ZNI0 430 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 DPP9Q86TI2 863 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CYP4Z1Q86W10 505 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 PSD4Q8NDX1 1056 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 EDEM1Q92611 657 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 OR52E6Q96RD3 313 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 BTBD2Q9BX70 525 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TMEM245Q9H330 911 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 ADPRHL2Q9NX46 363 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CNOT2Q9NZN8 540 aaKnown RBP4.68□□□□□ -1.66
PTPN13-201ENST00000316707 CORO2BQ9UQ03 480 aa4.68□□□□□ -1.66
PTPN13-201ENST00000316707 TLR6Q9Y2C9 796 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms