RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 CD47Q08722 323 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 MAPK11Q15759 364 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 PHKG1Q16816 387 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 HABP4Q5JVS0 413 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 ANKRD34AQ69YU3 496 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 MINDY2Q8NBR6 621 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 ZNF555Q8NEP9 628 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 S100ZQ8WXG8 99 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 MRPS31Q92665 395 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 AMBRA1Q9C0C7 1298 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 POLE4Q9NR33 117 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 MAGEL2Q9UJ55 1249 aa16.86■□□□□ 0.29
SCAMP4-201ENST00000316097 CCDC162PA2VCL2 907 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 LINC01553A4QN01 128 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 G3V2T6 193 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 GRM6O15303 877 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 KDELR3O43731 214 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 GLUD1P00367 558 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 ENO2P09104 434 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 RAP2AP10114 183 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 PPP3CCP48454 512 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 MTPNP58546 118 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 NTHL1P78549 312 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 CLCQ05315 142 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 FAM98BQ52LJ0 330 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 PAGE2BQ5JRK9 111 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 SPATA19Q7Z5L4 167 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 OR7A2PQ8NGA2 310 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 AURKBQ96GD4 344 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 MBOAT4Q96T53 435 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 MAGEE1Q9HCI5 957 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 EXD2Q9NVH0 621 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 UBA2Q9UBT2 640 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 SUN2Q9UH99 717 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 PCDHGC4Q9Y5F7 938 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 K7ERQ8 282 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 NDUFS2O75306 463 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 TULP3O75386 442 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 MYO1DO94832 1006 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 PRSS23O95084 383 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 CD160O95971 181 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 ATXN1LP0C7T5 689 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 PCYT1AP49585 367 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 ARF5P84085 180 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 CHRNB3Q05901 458 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 SELPLGQ14242 412 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 ZCCHC7Q8N3Z6 543 aaKnown RBP16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 NDNFQ8TB73 568 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 BLOC1S5Q8TDH9 187 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 PPM1MQ96MI6 270 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 NODALQ96S42 347 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 ARL5AQ9Y689 179 aa16.85■□□□□ 0.29
SCAMP4-201ENST00000316097 SUPT3HB4E1H0 165 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 VPS4BO75351 444 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 GMNNO75496 209 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 NADKO95544 446 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 BMP4P12644 408 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 EPCAMP16422 314 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 IL12AP29459 219 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 TPTEP56180 551 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 GABARAPL2P60520 117 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 PPP1R8Q12972 351 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 LCP2Q13094 533 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 ZNF549Q6P9A3 640 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 ST13P5Q8NFI4 369 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 CINPQ9BW66 212 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 POU2F3Q9UKI9 436 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 HCFC2Q9Y5Z7 792 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 ILVBLA1L0T0 632 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 A8MU76 341 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 M0R3G1 203 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 SLC7A4O43246 635 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 OLFM2O95897 454 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 ITIH1P19827 911 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 FDXRP22570 491 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 PRDX3P30048 256 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 RCVRNP35243 200 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 GSSP48637 474 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 CLCN4P51793 760 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 KCNAB2Q13303 367 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 LAPTM5Q13571 262 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 C9orf50Q5SZB4 431 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 SULT1C3Q6IMI6 304 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 LAIR2Q6ISS4 152 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 PLEKHG7Q6ZR37 379 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 HID1Q8IV36 788 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 APCDD1Q8J025 514 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 MFSD4AQ8N468 514 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 FAM86B1Q8N7N1 296 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 VMP1Q96GC9 406 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 PPP1R2P1Q96PQ5 205 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 ATOH8Q96SQ7 321 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 PAK1IP1Q9NWT1 392 aaPredicted RBP16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 PRRC2BQ5JSZ5 2229 aaKnown RBP16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 CEP290O15078 2479 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 EYSQ5T1H1 3165 aa16.84■□□□□ 0.29
SCAMP4-201ENST00000316097 SNX2O60749 519 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 ANXA6P08133 673 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 CSKP41240 450 aa16.83■□□□□ 0.29
SCAMP4-201ENST00000316097 PLIN5Q00G26 463 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms