RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 HTR3DQ70Z44 454 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ELMO1Q92556 727 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 FOXJ1Q92949 421 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 APOLD1Q96LR9 279 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 BDH2Q9BUT1 245 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 SMPD3Q9NY59 655 aaPredicted RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 HSFX1Q9UBD0 423 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ADGRE2Q9UHX3 823 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 UTS2RQ9UKP6 389 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 DMTF1Q9Y222 760 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 DLGAP4Q9Y2H0 992 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 HEMK1Q9Y5R4 338 aaPredicted RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 TCRBV5S2A0A599 114 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 OLFM2O95897 454 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 PDYNP01213 254 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ALBP02768 609 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 B4GALNT1Q00973 533 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ABRQ12979 859 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 MACC1Q6ZN28 852 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ANKRD33Q7Z3H0 272 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 HS3ST5Q8IZT8 346 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 OSCP1Q8WVF1 389 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 EGLN2Q96KS0 407 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 PAK6Q9NQU5 681 aaPredicted RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 MAGEL2Q9UJ55 1249 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 SLC28A1O00337 649 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 DLGAP1O14490 977 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 E2F6O75461 281 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 BCKDHAP12694 445 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 TACR1P25103 407 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 HTR1EP28566 365 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 MTHFRP42898 656 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 WDR5P61964 334 aaKnown RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 LSAMPQ13449 338 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 TEAD2Q15562 447 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 CDKN3Q16667 212 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 FAM98BQ52LJ0 330 aaKnown RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 INTS11Q5TA45 600 aaKnown RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 PROSER1Q86XN7 944 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 CLVS1Q8IUQ0 354 aaPredicted RBP11.29□□□□□ -0.6
PTPN2-201ENST00000309660 MED8Q96G25 268 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 DCUN1D5Q9BTE7 237 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ING2Q9H160 280 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 C1orf109Q9NX04 203 aa11.29□□□□□ -0.6
PTPN2-201ENST00000309660 ANKRD28O15084 1053 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 NOBOXO60393 691 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 MYCLP1P12525 358 aaPredicted RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 CYP4F3Q08477 520 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 SF1Q15637 639 aaKnown RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 NEDD8Q15843 81 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ATP6AP1Q15904 470 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 CARD16Q5EG05 197 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 LYPLAL1Q5VWZ2 237 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ZBTB46Q86UZ6 589 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ZFAND2BQ8WV99 257 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ING5Q8WYH8 240 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 TMBIM1Q969X1 311 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 SDCCAG3Q96C92 435 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ACPTQ9BZG2 426 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ADNPQ9H2P0 1102 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 LTB4R2Q9NPC1 389 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 HPS4Q9NQG7 708 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 SLC6A13Q9NSD5 602 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 WNT6Q9Y6F9 365 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ANAPC1Q9H1A4 1944 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 H0YJX3 145 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ACOX3O15254 700 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 B4GAT1O43505 415 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 EBLN1P0CF75 366 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ETV3P41162 512 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ESRRGP62508 458 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 NTHL1P78549 312 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 PTRH1Q86Y79 214 aaKnown RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 GTF2H4Q92759 462 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 VWCEQ96DN2 955 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 SLC32A1Q9H598 525 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 hCG_2014768A0A024R1R8 64 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 TRBV5-4A0A0C4DH59 114 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 IFRD1O00458 451 aaPredicted RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 GRM6O15303 877 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 RASAL1O95294 804 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 C1SP09871 688 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 PABPC1P11940 636 aaKnown RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 TYRP14679 529 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 JAK1P23458 1154 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 S100A3P33764 101 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 DYNC1I2Q13409 638 aaKnown RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 LY6G5CQ5SRR4 150 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 SPESP1Q6UW49 350 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 TMC8Q8IU68 726 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 PNPT1Q8TCS8 783 aaKnown RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 FAM120BQ96EK7 910 aaKnown RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 ZNF583Q96ND8 569 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms