RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SORCS1Q8WY21 1168 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 CD320Q9NPF0 282 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 KRT84Q9NSB2 600 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 ERVK-18Q9QC07 812 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 OR2AG2A6NM03 316 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 PRAMEF1O95521 474 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 NDST3O95803 873 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 KLKB1P03952 638 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 HCAR3P49019 387 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 AIF1P55008 147 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 PHC1P78364 1004 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 LCP2Q13094 533 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 APOFQ13790 326 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 ZNF678Q5SXM1 525 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 MDGA1Q8NFP4 955 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 S100ZQ8WXG8 99 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 IRGQQ8WZA9 623 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 MED8Q96G25 268 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 HMX1Q9NP08 348 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 RPRD1BQ9NQG5 326 aaKnown RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 FARSBQ9NSD9 589 aaKnown RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 KLHL20Q9Y2M5 609 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 EFCAB9A8MZ26 197 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 TNFRSF10BO14763 440 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 CA12O43570 354 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 SERPINA1P01009 418 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 LPOP22079 712 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 SOX6P35712 828 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 CSKP41240 450 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 EMP3P54852 163 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 RAB25P57735 213 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 FAM189BP81408 668 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 LRP8Q14114 963 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 BTG3Q14201 252 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 ZFP69Q49AA0 526 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 XKR4Q5GH76 650 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 NEK10Q6ZWH5 1172 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 LINC01599Q8WXQ3 324 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 RPL3LQ92901 407 aaKnown RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 TDRD1Q9BXT4 1180 aaKnown RBP12.42□□□□□ -0.42
RETREG3-201ENST00000309428 EBPLQ9BY08 206 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 REEP1Q9H902 201 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 SPASTQ9UBP0 616 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 TBC1D30Q9Y2I9 924 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 CPQQ9Y646 472 aa12.42□□□□□ -0.42
RETREG3-201ENST00000309428 DOCK6Q96HP0 2047 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 BBIP1A8MTZ0 92 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 RGS10O43665 173 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 ABCB7O75027 752 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 ADAM23O75077 832 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 B3GALT4O96024 378 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 G6PDP11413 515 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 PKMP14618 531 aaKnown RBP12.41□□□□□ -0.42
RETREG3-201ENST00000309428 RFC2P35250 354 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 KCNJ8Q15842 424 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 DGKKQ5KSL6 1271 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 CD300LGQ6UXG3 332 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 SETD9Q8NE22 299 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 OR9Q1Q8NGQ5 310 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 NDNFQ8TB73 568 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 GPR78Q96P69 363 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 TRMOQ9BU70 441 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 DCSTAMPQ9H295 470 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 CSNK1G1Q9HCP0 422 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 MALT1Q9UDY8 824 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 MAGEL2Q9UJ55 1249 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 ERGIC3Q9Y282 383 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 A0A1W2PQ45 241 aaPredicted RBP12.41□□□□□ -0.42
RETREG3-201ENST00000309428 A0A1W2PQY0 241 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 DFNA5O60443 496 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 PAX3P23760 479 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 ARMCX4Q5H9R4 360 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 SULT1C3Q6IMI6 304 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 EFL1Q7Z2Z2 1120 aaKnown RBP12.41□□□□□ -0.42
RETREG3-201ENST00000309428 TRIM48Q8IWZ4 208 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 COLGALT2Q8IYK4 626 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 CMTM8Q8IZV2 173 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 BEND7Q8N7W2 519 aaPredicted RBP12.41□□□□□ -0.42
RETREG3-201ENST00000309428 ARRDC2Q8TBH0 407 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 C17orf50Q8WW18 174 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 GSTO2Q9H4Y5 243 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 A0A1W2PRU2 124 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 SHMT2P34897 504 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 PRIM2P49643 509 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 HERVK_113P63132 956 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 C6orf141Q5SZD1 244 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 TYW3Q6IPR3 259 aaKnown RBP12.41□□□□□ -0.42
RETREG3-201ENST00000309428 ENPP6Q6UWR7 440 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 RBM23Q86U06 439 aaKnown RBP12.41□□□□□ -0.42
RETREG3-201ENST00000309428 TSPAN33Q86UF1 283 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 SVOPQ8N4V2 548 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 GPR156Q8NFN8 814 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 FOXJ1Q92949 421 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 NSMCE3Q96MG7 304 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 ERVK-6Q9BXR3 956 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 SEZ6LQ9BYH1 1024 aa12.41□□□□□ -0.42
RETREG3-201ENST00000309428 DNAH14Q0VDD8 3507 aa12.4□□□□□ -0.42
RETREG3-201ENST00000309428 ELOVL7A1L3X0 281 aa12.4□□□□□ -0.42
RETREG3-201ENST00000309428 NOTOA8MTQ0 251 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms