RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 UBE2UQ5VVX9 321 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 DUS1LQ6P1R4 473 aaKnown RBP9.13□□□□□ -0.95
XCR1-201ENST00000309285 TMPRSS11AQ6ZMR5 421 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 PAQR9Q6ZVX9 377 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 LDB1Q86U70 411 aaPredicted RBP9.13□□□□□ -0.95
XCR1-201ENST00000309285 PROSER1Q86XN7 944 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 ZMIZ2Q8NF64 920 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 GPR156Q8NFN8 814 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 ACTRT2Q8TDY3 377 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 USP7Q93009 1102 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 SLC7A6OSQ96CW6 309 aaPredicted RBP9.13□□□□□ -0.95
XCR1-201ENST00000309285 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.13□□□□□ -0.95
XCR1-201ENST00000309285 KAT8Q9H7Z6 458 aaKnown RBP9.13□□□□□ -0.95
XCR1-201ENST00000309285 EBF1Q9UH73 591 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 ANKRD6Q9Y2G4 727 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 PEX16Q9Y5Y5 336 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 DOCK3Q8IZD9 2030 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 KNL1Q8NG31 2342 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 TRBV23OR9-2A0A075B6M9 112 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 FAM172BPA6NC97 362 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 OR6C75A6NL08 312 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 CHURC1-FNTBB4DL54 471 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 PLOD2O00469 737 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 ERAL1O75616 437 aaKnown RBP9.13□□□□□ -0.95
XCR1-201ENST00000309285 LBPP18428 481 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 PAICSP22234 425 aaKnown RBP9.13□□□□□ -0.95
XCR1-201ENST00000309285 NR4A2P43354 598 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 GALNT2Q10471 571 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 ZMYND11Q15326 602 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 PYHIN1Q6K0P9 492 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 PNPT1Q8TCS8 783 aaKnown RBP9.13□□□□□ -0.95
XCR1-201ENST00000309285 SPPL2BQ8TCT7 592 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 PSMG2Q969U7 264 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 HAPLN3Q96S86 360 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 TTYH2Q9BSA4 534 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 BEX2Q9BXY8 128 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 FAM126AQ9BYI3 521 aaPredicted RBP9.13□□□□□ -0.95
XCR1-201ENST00000309285 ENTPD4Q9Y227 616 aa9.13□□□□□ -0.95
XCR1-201ENST00000309285 LRRC14BA6NHZ5 514 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 ISM1B1AKI9 464 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 SLC9A3R1O14745 358 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 COX7A2P14406 83 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 ZNF460Q14592 562 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 CYP20A1Q6UW02 462 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 ZNF517Q6ZMY9 492 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 CHST15Q7LFX5 561 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 LRRTM3Q86VH5 581 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 SPAG16Q8N0X2 631 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 OR10G6Q8NH81 332 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 GAL3ST3Q96A11 431 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 TTPALQ9BTX7 342 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 NLNQ9BYT8 704 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 OSBPL2Q9H1P3 480 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 DNAJC28Q9NX36 388 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 NME7Q9Y5B8 376 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 CLIC3O95833 236 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 SELPP16109 830 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 RPL17P18621 184 aaKnown RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 GMPRP36959 345 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 IDH3AP50213 366 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 MXD1Q05195 221 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 C4orf46Q504U0 113 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 RNASE12Q5GAN4 147 aaKnown RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 OR52K2Q8NGK3 314 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 GATA6Q92908 595 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 HMCESQ96FZ2 354 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 ERGIC3Q9Y282 383 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 LYVE1Q9Y5Y7 322 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 PRAMEF33A0A0G2JMD5 474 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 ZNF99A8MXY4 864 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 C9JVG2 144 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 PRAMEF10O60809 474 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 AOC2O75106 756 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 OR6A2O95222 327 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 ANXA5P08758 320 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 RHOQP17081 205 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 MLLT6P55198 1093 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 IRF5Q13568 498 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 IL18Q14116 193 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 CPSF6Q16630 551 aaKnown RBP eCLIP9.12□□□□□ -0.95
XCR1-201ENST00000309285 GCNT7Q6ZNI0 430 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 FAM20CQ8IXL6 584 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 CAPNS2Q96L46 248 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 SAV1Q9H4B6 383 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 MOCS1Q9NZB8 636 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 A8MU76 341 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 EFCAB9A8MZ26 197 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 STX16-NPEPL1H3BU86 382 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 ALDOAP04075 364 aaKnown RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 SLC10A3P09131 477 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 CYBAP13498 195 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 NAT1P18440 290 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 GDI2P50395 445 aaKnown RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 GALNT3Q14435 633 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 PLA2G4EQ3MJ16 856 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 FUT10Q6P4F1 479 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 PTGR2Q8N8N7 351 aaPredicted RBP9.12□□□□□ -0.95
XCR1-201ENST00000309285 EEF1AKMT1Q8WVE0 214 aa9.12□□□□□ -0.95
XCR1-201ENST00000309285 PPP1R16AQ96I34 528 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms