RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CEP44Q9C0F1 390 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 ZBTB20Q9HC78 741 aaPredicted RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 NUP214P35658 2090 aaPredicted RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 MIA3Q5JRA6 1907 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 ARNTLO00327 626 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 IFRD1O00458 451 aaPredicted RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 MUSKO15146 869 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 IDH3BO43837 385 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 ULK1O75385 1050 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 LRATO95237 230 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 IGLV3-25P01717 112 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 S100A3P33764 101 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 SUOXP51687 545 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 HUNKP57058 714 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 IL10RBQ08334 325 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 PSAPL1Q6NUJ1 521 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 GALNT10Q86SR1 603 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 TLK2Q86UE8 772 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 AMER2Q8N7J2 671 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 GPR150Q8NGU9 434 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 GTF2H4Q92759 462 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 ISG20Q96AZ6 181 aaKnown RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 TSSK3Q96PN8 268 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 NACA2Q9H009 215 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 LATS2Q9NRM7 1088 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 HEBP1Q9NRV9 189 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 C1orf109Q9NX04 203 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 AFF4Q9UHB7 1163 aaKnown RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 SLCO3A1Q9UIG8 710 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 SPO11Q9Y5K1 396 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 A0A0U1RQS6 177 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 PDZK1P1A8MUH7 402 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 EVPLLA8MZ36 301 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 MED26O95402 600 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 TTPAP49638 278 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 IL18R1Q13478 541 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 TMEM132CQ8N3T6 1108 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 PJA1Q8NG27 643 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 DYNC2LI1Q8TCX1 351 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 SKA2Q8WVK7 121 aaPredicted RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 PYURFQ96I23 114 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 REXO5Q96IC2 774 aaKnown RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 NSUN3Q9H649 340 aaKnown RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 CCNB1IP1Q9NPC3 277 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 FBXO8Q9NRD0 319 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 TRMT13Q9NUP7 481 aaKnown RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 TNPO3Q9Y5L0 923 aaKnown RBP10.93□□□□□ -0.66
PTPN7-201ENST00000309017 MYLKQ15746 1914 aa10.93□□□□□ -0.66
PTPN7-201ENST00000309017 FAM47E-STBD1D6RA91 191 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 PER2O15055 1255 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 NDUFB5O43674 189 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 UPK1BO75841 260 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 DDNO94850 711 aaPredicted RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 RYKP34925 604 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 GNPDA1P46926 289 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 HNRNPFP52597 415 aaKnown RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 TWF1Q12792 350 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 MAD2L1Q13257 205 aaPredicted RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 PLEKHG6Q3KR16 790 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 LAIR2Q6ISS4 152 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 GATAD2AQ86YP4 633 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 PIANPQ8IYJ0 282 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 PSD4Q8NDX1 1056 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 PHF10Q8WUB8 498 aaKnown RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 TPD52L3Q96J77 140 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 CTRCQ99895 268 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 RTP3Q9BQQ7 232 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 AP5M1Q9H0R1 490 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 ACTL8Q9H568 366 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 CPNE5Q9HCH3 593 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 ZNF490Q9ULM2 529 aaPredicted RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 PCDHGC4Q9Y5F7 938 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 SNX8Q9Y5X2 465 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 MOXD2PA6NHM9 499 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 TTC34A8MYJ7 566 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 GPR39O43194 453 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 F2P00734 622 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 DAB2P98082 770 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 CPSF6Q16630 551 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 TPRG1LQ5T0D9 272 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 ZCCHC8Q6NZY4 707 aaKnown RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 OR7D4Q8NG98 312 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 UBE2FQ969M7 185 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 BTN2A3PQ96KV6 586 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 TP63Q9H3D4 680 aaPredicted RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 LRTM1Q9HBL6 345 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 NEK6Q9HC98 313 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 FARSBQ9NSD9 589 aaKnown RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 DCAF13Q9NV06 445 aaKnown RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 TMEM248Q9NWD8 314 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 OPTCQ9UBM4 332 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 PMF1-BGLAPU3KQ54 211 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 SAGE2PA6NJ88 616 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 GOLGA8CPA6NN73 597 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 AGRPO00253 132 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 TAF4O00268 1085 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 LPOP22079 712 aaPredicted RBP10.92□□□□□ -0.66
PTPN7-201ENST00000309017 MASP1P48740 699 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 GPR15P49685 360 aa10.92□□□□□ -0.66
PTPN7-201ENST00000309017 BCL2A1Q16548 175 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms