RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 BNC1Q01954 994 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ILF2Q12905 390 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TAF10Q12962 218 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 RFTN1Q14699 578 aaPredicted RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 PCLAFQ15004 111 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 PDK1Q15118 436 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TAF5Q15542 800 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 COL28A1Q2UY09 1125 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ANKRD20A4Q4UJ75 823 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 HSP90AA5PQ58FG0 334 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 LY6G5CQ5SRR4 150 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 OGFRL1Q5TC84 451 aaPredicted RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 RNF220Q5VTB9 566 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 IRAK1BP1Q5VVH5 260 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 CES4AQ5XG92 561 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 EGFLAMQ63HQ2 1017 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TRNP1Q6NT89 227 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 EPGNQ6UW88 154 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 C16orf89Q6UX73 402 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 DENND5BQ6ZUT9 1274 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 PAQR9Q6ZVX9 377 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 LPCAT2Q7L5N7 544 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM25Q86YD3 366 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 SPATA2LQ8IUW3 424 aaPredicted RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 CCDC103Q8IW40 242 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 UNC5BQ8IZJ1 945 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TMEM86AQ8N2M4 240 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 FBXW8Q8N3Y1 598 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 MARVELD2Q8N4S9 558 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 MINDY1Q8N5J2 469 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 CPSF7Q8N684 471 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 RCBTB1Q8NDN9 531 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 NUDT10Q8NFP7 164 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 SCAMP5Q8TAC9 235 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 DDI1Q8WTU0 396 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 SLC35F5Q8WV83 523 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TFB1MQ8WVM0 346 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 HTR3CQ8WXA8 447 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 LZICQ8WZA0 190 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 DLG3Q92796 817 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 DGCR14Q96DF8 476 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 NUDT11Q96G61 164 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 PCED1BQ96HM7 432 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 FUBP3Q96I24 572 aaKnown RBP eCLIP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 HSFY1Q96LI6 401 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF560Q96MR9 790 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TWNKQ96RR1 684 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 MRPL45Q9BRJ2 306 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 MECRQ9BV79 373 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 NUSAP1Q9BXS6 441 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 B3GNT5Q9BYG0 378 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 DPEP3Q9H4B8 488 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 SMYD3Q9H7B4 428 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 LRRC40Q9H9A6 602 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 MRPL40Q9NQ50 206 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 CFAP97Q9P2B7 532 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 COPG2Q9UBF2 871 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TSPAN16Q9UKR8 245 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 EMCNQ9ULC0 261 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 RAB26Q9ULW5 256 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 PADI4Q9UM07 663 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 PSMD13Q9UNM6 376 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ANKRD6Q9Y2G4 727 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 HEY1Q9Y5J3 304 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 SLCO1B1Q9Y6L6 691 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 RP1P56715 2156 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 UTP20O75691 2785 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TLN1Q9Y490 2541 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 EME2A4GXA9 379 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 RGSL1A5PLK6 1076 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ARHGAP42A6NI28 874 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CYSRT1A8MQ03 144 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PRRT4C9JH25 899 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 H7BY64 318 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PAPSS1O43252 624 aaPredicted RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 COCHO43405 550 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TBX1O43435 398 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TIMM44O43615 452 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PIAS1O75925 651 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 BAG2O95816 211 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 APODP05090 189 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CFIP05156 583 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 SERPINF2P08697 491 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 ZDHHC11BP0C7U3 371 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 FTH1P19P0C7X4 201 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 LCP1P13796 627 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CPA3P15088 417 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 VCLP18206 1134 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 WARSP23381 471 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PCSK1P29120 753 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TYK2P29597 1187 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 HOXC12P31275 282 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 SERPINB5P36952 375 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 EIF2DP41214 584 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 PNPLA4P41247 253 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 GRIA2P42262 883 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 TNFRSF4P43489 277 aa4.84□□□□□ -1.63
CKS1B-201ENST00000308987 RPL5P46777 297 aaKnown RBP4.84□□□□□ -1.63
CKS1B-201ENST00000308987 CPA2P48052 419 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms