RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TMEM233B4DJY2 109 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 CLDN4O14493 209 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 SNX4O95219 450 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 S100A9P06702 114 aaKnown RBP13.69□□□□□ -0.22
PRKCB-201ENST00000303531 CHRM5P08912 532 aaPredicted RBP13.69□□□□□ -0.22
PRKCB-201ENST00000303531 CKMT2P17540 419 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 XRCC1P18887 633 aaPredicted RBP13.69□□□□□ -0.22
PRKCB-201ENST00000303531 DGKGP49619 791 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 DPY19L1Q2PZI1 675 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 SIRPB2Q5JXA9 342 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 AQP12AQ8IXF9 295 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 IL1RAPQ9NPH3 570 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 PMF1-BGLAPU3KQ54 211 aa13.69□□□□□ -0.22
PRKCB-201ENST00000303531 PRKCGP05129 697 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 CDH1P12830 882 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 ITGA3P26006 1051 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 STXBP1P61764 594 aaKnown RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 SLC25A11Q02978 314 aaKnown RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 IFNLR1Q8IU57 520 aaPredicted RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 HMGCS1Q01581 520 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 TARDBPQ13148 414 aaKnown RBP eCLIP13.68□□□□□ -0.223e-7■■■■□ 20.9
PRKCB-201ENST00000303531 E2F2Q14209 437 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 GANABQ14697 944 aaKnown RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 FBXO42Q6P3S6 717 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 PGBD2Q6P3X8 592 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 GLIS1Q8NBF1 620 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 CITED4Q96RK1 184 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 MED28Q9H204 178 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 PCDH7O60245 1069 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 PTPN2P17706 415 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 ATP6V1C2Q8NEY4 427 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 OR2AG1Q9H205 316 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 KCNN2Q9H2S1 579 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 ERVK-21P61565 698 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 UBAP2Q5T6F2 1119 aaKnown RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 HID1Q8IV36 788 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 PYCR2Q96C36 320 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 PCBD2Q9H0N5 130 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF395Q9H8N7 513 aaPredicted RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 TMLHEQ9NVH6 421 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 DNAJB4Q9UDY4 337 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 ARPC2O15144 300 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 PRODHO43272 600 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 SCNN1AP37088 669 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 KHKP50053 298 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 MINDY4Q4G0A6 757 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 TNFAIP8L3Q5GJ75 292 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF311Q5JNZ3 666 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 TAF8Q7Z7C8 310 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 C12orf42Q96LP6 360 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 DNAAF2Q9NVR5 837 aaKnown RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 ZDHHC2Q9UIJ5 367 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 SLC18A1P54219 525 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 SEC13P55735 322 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 EEFSECP57772 596 aaKnown RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 MSS51Q4VC12 460 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 CRTC2Q53ET0 693 aaPredicted RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 OR10H4Q8NGA5 316 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 CANT1Q8WVQ1 401 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 ZBED6CLQ96FA7 236 aaPredicted RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 GFM1Q96RP9 751 aaKnown RBP13.68□□□□□ -0.22
PRKCB-201ENST00000303531 OAZ3Q9UMX2 235 aa13.68□□□□□ -0.22
PRKCB-201ENST00000303531 UGT1A6P19224 532 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 UGT1A1P22309 533 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 UGT1A4P22310 534 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 UGT1A3P35503 534 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 OGDHQ02218 1023 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 ILF3Q12906 894 aaKnown RBP eCLIP13.67□□□□□ -0.228e-8■■■■■ 37
PRKCB-201ENST00000303531 DAG1Q14118 895 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 RBM18Q96H35 190 aaKnown RBP13.67□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF317Q96PQ6 595 aaPredicted RBP13.67□□□□□ -0.22
PRKCB-201ENST00000303531 SLC39A3Q9BRY0 314 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 RBM47A0AV96 593 aaKnown RBP13.67□□□□□ -0.22
PRKCB-201ENST00000303531 PPEF2O14830 753 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 UBE2J2Q8N2K1 259 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 OR4C6Q8NH72 309 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 FBXL18Q96ME1 805 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 OSBPL2Q9H1P3 480 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 PPM1HQ9ULR3 514 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 LRRC72A6NJI9 287 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 PI15O43692 258 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 IL7RP16871 459 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 SP2Q02086 613 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 BHLHE41Q9C0J9 482 aaPredicted RBP13.67□□□□□ -0.22
PRKCB-201ENST00000303531 MINDY3Q9H8M7 445 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 EFCAB9A8MZ26 197 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 ZNF879B4DU55 563 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 PDLIM1O00151 329 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 GAD2Q05329 585 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 PIK3R3Q92569 461 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 UFD1Q92890 307 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 TUBGCP5Q96RT8 1024 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 OR51V1Q9H2C8 321 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 RBPJLQ9UBG7 517 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 SLC2A6Q9UGQ3 507 aa13.67□□□□□ -0.22
PRKCB-201ENST00000303531 ALPIP09923 528 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms