RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 UBE2R2Q712K3 238 aaPredicted RBP23.79■■□□□ 1.4
HOXC9-201ENST00000303450 CCDC91Q7Z6B0 441 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 TBC1D1Q86TI0 1168 aaPredicted RBP23.79■■□□□ 1.4
HOXC9-201ENST00000303450 TDRPQ86YL5 185 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 OR4E2Q8NGC2 313 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 WDR48Q8TAF3 677 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 HNRNPLLQ8WVV9 542 aaKnown RBP23.79■■□□□ 1.4
HOXC9-201ENST00000303450 ZMYND15Q9H091 742 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 EPB41L1Q9H4G0 881 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 TFB2MQ9H5Q4 396 aaKnown RBP23.79■■□□□ 1.4
HOXC9-201ENST00000303450 ARHGEF33A8MVX0 844 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 GFYI3L273 518 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 DUX1O43812 170 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 C2P06681 752 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 TYRP1P17643 537 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 PPM1JQ5JR12 505 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 BEND6Q5SZJ8 279 aaPredicted RBP23.79■■□□□ 1.4
HOXC9-201ENST00000303450 KLHL35Q6PF15 583 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 DHRS13Q6UX07 377 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 GFM1Q96RP9 751 aaKnown RBP23.79■■□□□ 1.4
HOXC9-201ENST00000303450 DERL2Q9GZP9 239 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 SRMSQ9H3Y6 488 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 CTNNAL1Q9UBT7 734 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 CIDEBQ9UHD4 219 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 PLAGL1Q9UM63 463 aa23.79■■□□□ 1.4
HOXC9-201ENST00000303450 A0A087X1B8 175 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 A0A096LPK6 155 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 A0A1W2PQM1 296 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 TLDC2A0PJX2 215 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 RASGRF2O14827 1237 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 CASC3O15234 703 aaKnown RBP23.78■■□□□ 1.4
HOXC9-201ENST00000303450 CDH16O75309 829 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 DKK1O94907 266 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 PROS1P07225 676 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 CD1CP29017 333 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 SP140Q13342 867 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 SPIDRQ14159 915 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 CSHL1Q14406 222 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 USP53Q70EK8 1073 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 SPATA6LQ8N4H0 392 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 ANKRD7Q92527 254 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 ISL2Q96A47 359 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 UBXN10Q96LJ8 280 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 VPS11Q9H270 941 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 XKR8Q9H6D3 395 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 ADAMTS6Q9UKP5 1117 aa23.78■■□□□ 1.4
HOXC9-201ENST00000303450 BTN3A1O00481 513 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 SLC16A5O15375 505 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 CYP2A7P20853 494 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 SHMT2P34897 504 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 SLC26A3P40879 764 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 CCSMST1Q4G0I0 132 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.77■■□□□ 1.4
HOXC9-201ENST00000303450 AMIGO1Q86WK6 493 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 RAB42Q8N4Z0 105 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 FBXO15Q8NCQ5 510 aaPredicted RBP23.77■■□□□ 1.4
HOXC9-201ENST00000303450 MCOLN3Q8TDD5 553 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 NCSTNQ92542 709 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 SLC12A9Q9BXP2 914 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 ROPN1BQ9BZX4 212 aaPredicted RBP23.77■■□□□ 1.4
HOXC9-201ENST00000303450 UNKQ9C0B0 810 aaKnown RBP23.77■■□□□ 1.4
HOXC9-201ENST00000303450 ROPN1Q9HAT0 212 aaPredicted RBP23.77■■□□□ 1.4
HOXC9-201ENST00000303450 PARVBQ9HBI1 364 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 ARGLU1Q9NWB6 273 aaPredicted RBP23.77■■□□□ 1.4
HOXC9-201ENST00000303450 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.77■■□□□ 1.4
HOXC9-201ENST00000303450 ATXN7L1Q9ULK2 861 aaPredicted RBP23.77■■□□□ 1.4
HOXC9-201ENST00000303450 ICKQ9UPZ9 632 aa23.77■■□□□ 1.4
HOXC9-201ENST00000303450 PABPN1LA6NDY0 278 aaKnown RBP23.76■■□□□ 1.39
HOXC9-201ENST00000303450 NTN3O00634 580 aaPredicted RBP23.76■■□□□ 1.39
HOXC9-201ENST00000303450 CPNE6O95741 557 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 SYF2O95926 243 aaKnown RBP23.76■■□□□ 1.39
HOXC9-201ENST00000303450 MPOP05164 745 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 TPBGLP0DKB5 382 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 MAGEA12P43365 314 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 CSRP3P50461 194 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 ATP6V0D1P61421 351 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 GRB7Q14451 532 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 RASA2Q15283 850 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 RASGRP3Q8IV61 690 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 OR9A1PQ8NGU1 263 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 RSC1A1Q92681 617 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 RDH14Q9HBH5 336 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 OGFRQ9NZT2 677 aa23.76■■□□□ 1.39
HOXC9-201ENST00000303450 ANKRD12Q6UB98 2062 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 FAM221BA6H8Z2 402 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 OR6C74A6NCV1 312 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 NPEPPSL1A6NEC2 478 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 CDC7O00311 574 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 HIST1H2AGP0C0S8 130 aaPredicted RBP23.75■■□□□ 1.39
HOXC9-201ENST00000303450 CD1DP15813 335 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 HIST1H2ADP20671 130 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 GMPRP36959 345 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 CAPZBP47756 277 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 RAB28P51157 221 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 INSM1Q01101 510 aaPredicted RBP23.75■■□□□ 1.39
HOXC9-201ENST00000303450 SQSTM1Q13501 440 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 TIFABQ6ZNK6 161 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 OOSP2Q86WS3 158 aa23.75■■□□□ 1.39
HOXC9-201ENST00000303450 RIBC1Q8N443 379 aaPredicted RBP23.75■■□□□ 1.39
HOXC9-201ENST00000303450 DLG3Q92796 817 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms