RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PROKR1Q8TCW9 393 aa21.47■■□□□ 1.03
TPM4-201ENST00000300933 INTS7Q9NVH2 962 aaKnown RBP21.47■■□□□ 1.03
TPM4-201ENST00000300933 KANSL1LA0AUZ9 987 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 NCK1P16333 377 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 CD247P20963 164 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 HMOX2P30519 316 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 KCNK10P57789 538 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 PRKCQQ04759 706 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 PCBP2Q15366 365 aaKnown RBP eCLIP21.46■■□□□ 1.033e-6■■■□□ 14.6
TPM4-201ENST00000300933 ZBED5Q49AG3 693 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 TCEAL5Q5H9L2 206 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 SLC2A7Q6PXP3 512 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 MACC1Q6ZN28 852 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 CANT1Q8WVQ1 401 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 COX4I2Q96KJ9 171 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 GPATCH1Q9BRR8 931 aaKnown RBP21.46■■□□□ 1.03
TPM4-201ENST00000300933 ZFP14Q9HCL3 533 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 KLQ9UEF7 1012 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 H0YJX3 145 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 CBFA2T3O75081 653 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 MTHFD1P11586 935 aaKnown RBP21.46■■□□□ 1.03
TPM4-201ENST00000300933 ETV3P41162 512 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 RELAQ04206 551 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 ZXDCQ2QGD7 858 aaPredicted RBP21.46■■□□□ 1.03
TPM4-201ENST00000300933 AP5B1Q2VPB7 878 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 FGD3Q5JSP0 725 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 GDPD4Q6W3E5 623 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 HSD11B1LQ7Z5J1 315 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 DHFR2Q86XF0 187 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 RHBDF1Q96CC6 855 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 ZFYVE19Q96K21 471 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 NUSAP1Q9BXS6 441 aaKnown RBP21.46■■□□□ 1.03
TPM4-201ENST00000300933 AURKCQ9UQB9 309 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 OARD1Q9Y530 152 aa21.46■■□□□ 1.03
TPM4-201ENST00000300933 POLR3HQ9Y535 204 aaPredicted RBP21.46■■□□□ 1.03
TPM4-201ENST00000300933 A0A087WXM4 84 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 CCDC154A6NI56 674 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 OCM2P0CE71 109 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 OCMP0CE72 109 aaPredicted RBP21.45■■□□□ 1.02
TPM4-201ENST00000300933 NSG1P42857 185 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 POLR2JP52435 117 aaKnown RBP21.45■■□□□ 1.02
TPM4-201ENST00000300933 ERVK-8P63133 956 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 FOXJ1Q92949 421 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 NAA50Q9GZZ1 169 aaKnown RBP21.45■■□□□ 1.02
TPM4-201ENST00000300933 CXorf21Q9HAI6 301 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 SMOXQ9NWM0 555 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 OPTCQ9UBM4 332 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 COQ6Q9Y2Z9 468 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 V9GYQ6 96 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 OR2AG2A6NM03 316 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 LOC730098B7Z3J9 87 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 ZBTB11O95625 1053 aaPredicted RBP21.45■■□□□ 1.02
TPM4-201ENST00000300933 CEBPBP17676 345 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 SLC7A1P30825 629 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 SPINT3P49223 89 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 METAP1P53582 386 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 PTGR1Q14914 329 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 GPR33Q49SQ1 333 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 TMEM240Q5SV17 173 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 CBR4Q8N4T8 237 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 PDPRQ8NCN5 879 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 ITFG1Q8TB96 612 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 TFAP2CQ92754 450 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 ZDHHC3Q9NYG2 299 aa21.45■■□□□ 1.02
TPM4-201ENST00000300933 ANTXRLA6NF34 631 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 GRXCR1A8MXD5 290 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 MATN4O95460 622 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 SLC2A4P14672 509 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 PSMD8P48556 350 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 CPSF6Q16630 551 aaKnown RBP eCLIP21.44■■□□□ 1.02
TPM4-201ENST00000300933 C16orf87Q6PH81 154 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 SPATA19Q7Z5L4 167 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 ROPN1LQ96C74 230 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 LYSMD1Q96S90 227 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 RAD9AQ99638 391 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 CD244Q9BZW8 370 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 ZDHHC4Q9NPG8 344 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 MRGBPQ9NV56 204 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 ARL15Q9NXU5 204 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 ITM2BQ9Y287 266 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 TNPO3Q9Y5L0 923 aaKnown RBP21.44■■□□□ 1.02
TPM4-201ENST00000300933 A0A1W2PP18 115 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 CTSLP07711 333 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 VIPR2P41587 438 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 RECQLP46063 649 aaPredicted RBP21.44■■□□□ 1.02
TPM4-201ENST00000300933 RPIAP49247 311 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 C21orf59P57076 290 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 BNIP3Q12983 259 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 PMS2P3Q13401 168 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 CRY1Q16526 586 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 TMEM26Q6ZUK4 368 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 CBARPQ8N350 705 aaPredicted RBP21.44■■□□□ 1.02
TPM4-201ENST00000300933 CLHC1Q8NHS4 586 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 VPS50Q96JG6 964 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 CERS4Q9HA82 394 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 RIC8BQ9NVN3 520 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 ERVW-1Q9UQF0 538 aa21.44■■□□□ 1.02
TPM4-201ENST00000300933 FUOMA2VDF0 154 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 H3BMQ9 156 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 J3QRK9 145 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms